RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 KRT6AP02538 564 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KRT6BP04259 564 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PRR35P0CG20 571 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PCNAP12004 261 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PVRP15151 417 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PNLIPP16233 465 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 AMD1P17707 334 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 MAGP20916 626 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 TGM1P22735 817 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HRH2P25021 359 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CD1CP29017 333 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 BCL6P41182 706 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 GPR3P46089 330 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CAPZBP47756 277 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KRT6CP48668 564 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ATXN3P54252 364 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 RAC1P63000 192 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 REEP5Q00765 189 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HMGCS1Q01581 520 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ZIC1Q15915 447 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HIST2H2ACQ16777 129 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC5A12Q1EHB4 618 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PAGE2BQ5JRK9 111 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 FCRL6Q6DN72 434 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HIST2H2AA3Q6FI13 130 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ARMC6Q6NXE6 501 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 FBXO42Q6P3S6 717 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 GUSBP11Q6P575 273 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KLHL35Q6PF15 583 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SPESP1Q6UW49 350 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 TMIGD1Q6UXZ0 262 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ALYREFQ86V81 257 aaKnown RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PAQR7Q86WK9 346 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PLD3Q8IV08 490 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KRT78Q8N1N4 520 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 Q8N9G6 341 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ANKRD53Q8N9V6 530 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 HUS1BQ8NHY5 278 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ACTRT2Q8TDY3 377 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SELENOMQ8WWX9 145 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KISS1RQ969F8 398 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 RILPQ96NA2 401 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 MTERF1Q99551 399 aaKnown RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CCT7Q99832 543 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 AIF1LQ9BQI0 150 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PLCD4Q9BRC7 762 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CCDC28BQ9BUN5 200 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SARGQ9BW04 601 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 ACPTQ9BZG2 426 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 RAB33BQ9H082 229 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 RHBGQ9H310 441 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 GSX1Q9H4S2 264 aaPredicted RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PARD6AQ9NPB6 346 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 TCF7L2Q9NQB0 619 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 SEMA4GQ9NTN9 838 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 EPHA6Q9UF33 1036 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 PILRAQ9UKJ1 303 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 POMT2Q9UKY4 750 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 TSC22D4Q9Y3Q8 395 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 KLK4Q9Y5K2 254 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 CACNA1IQ9P0X4 2223 aa6.73□□□□□ -1.33
LSM3P3-201ENST00000436601 BDP1A6H8Y1 2624 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TRAV20A0A0B4J274 112 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 A0A0J9YY10 115 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TRBC2A0A5B9 178 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 OR2A25A4D2G3 310 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 MAGEB17A8MXT2 336 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 E9PBE3 544 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 NPIPB8E9PQR5 432 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FOXE1O00358 373 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FCHO1O14526 889 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PLD2O14939 933 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 LSM1O15116 133 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 RGS14O43566 566 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 OR1F1O43749 312 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 KIF1CO43896 1103 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 KLHL41O60662 606 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CTSVO60911 334 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PEX11AO75192 247 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 VPS4BO75351 444 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 FKBP9O95302 570 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ETHE1O95571 254 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 TBX6O95947 436 aaPredicted RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 LMNAP02545 664 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CKMT1AP12532 417 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CD59P13987 128 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CXCR2P25025 360 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CSF2RBP32927 897 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 PIK3CBP42338 1070 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 GFERP55789 205 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 RELAQ04206 551 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF33BQ06732 778 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 CSTF3Q12996 717 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 IFT88Q13099 833 aa6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 DDX39BQ13838 428 aaKnown RBP6.72□□□□□ -1.33
LSM3P3-201ENST00000436601 KIAA0040Q15053 153 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms