RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 COMMD6Q7Z4G1 85 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MCATQ8IVS2 390 aaKnown RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 FAM9CQ8IZT9 166 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 LIX1Q8N485 282 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 SRFBP1Q8NEF9 429 aaKnown RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 KLHL6Q8WZ60 621 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MS4A6EQ96DS6 147 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 GFM1Q96RP9 751 aaKnown RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MACROD1Q9BQ69 325 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 AICDAQ9GZX7 198 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 ZNF768Q9H5H4 540 aaKnown RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 SYNDIG1Q9H7V2 258 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 PLCL2Q9UPR0 1127 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 DLGAP4Q9Y2H0 992 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MUC6Q6W4X9 2439 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 NTN3O00634 580 aaPredicted RBP21.93■■□□□ 1.1
CPSF4-204ENST00000436336 ANKRD34CP0C6C1 535 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 TIA1P31483 386 aaKnown RBP eCLIP21.93■■□□□ 1.1
CPSF4-204ENST00000436336 GABRA4P48169 554 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 ARL4DP49703 201 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 RAE1P78406 368 aaKnown RBP21.93■■□□□ 1.1
CPSF4-204ENST00000436336 OR2L5Q8NG80 312 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 SLC41A2Q96JW4 573 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 CDC6Q99741 560 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 NLNQ9BYT8 704 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 KLHL31Q9H511 634 aa21.93■■□□□ 1.1
CPSF4-204ENST00000436336 URADA6NGE7 173 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 PSMD12O00232 456 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 ZSCAN9O15535 394 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 P2RX6O15547 441 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 HCRTR1O43613 425 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 SDC1P18827 310 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 GPX3P22352 226 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 SEPHS1P49903 392 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 VSX2P58304 361 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 KRT72Q14CN4 511 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 DEFB110Q30KQ9 67 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TRIM40Q6P9F5 258 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 PAGE2Q7Z2X7 111 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TREML1Q86YW5 311 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 D2HGDHQ8N465 521 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 WDR48Q8TAF3 677 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 GAL3ST3Q96A11 431 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 EBPLQ9BY08 206 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 ZNF717Q9BY31 904 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 ZIM2Q9NZV7 527 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 MCM8Q9UJA3 840 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 A8MU76 341 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TXNDC9O14530 226 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 PCDH7O60245 1069 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 UBOX5O94941 541 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 EIF2S1P05198 315 aaKnown RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 THRAP10827 490 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 PIK3R1P27986 724 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 BSGP35613 385 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TSFMP43897 325 aaKnown RBP21.92■■□□□ 1.1
CPSF4-204ENST00000436336 ACADVLP49748 655 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TGM3Q08188 693 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TMTC4Q5T4D3 741 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 UBE3DQ7Z6J8 389 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 NUDT13Q86X67 352 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 CSNK1A1LQ8N752 337 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 KCT2Q8NC54 265 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 QRFPRQ96P65 431 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 TMEM45AQ9NWC5 275 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 ADAM29Q9UKF5 820 aa21.92■■□□□ 1.1
CPSF4-204ENST00000436336 COL27A1Q8IZC6 1860 aaPredicted RBP21.91■■□□□ 1.1
CPSF4-204ENST00000436336 IGHV5-10-1A0A0J9YXX1 117 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 ERI3O43414 337 aaKnown RBP21.91■■□□□ 1.1
CPSF4-204ENST00000436336 GDF9O60383 454 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 ANXA4P09525 319 aaPredicted RBP21.91■■□□□ 1.1
CPSF4-204ENST00000436336 NELFEP18615 380 aaKnown RBP21.91■■□□□ 1.1
CPSF4-204ENST00000436336 SPIDRQ14159 915 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 PTGR1Q14914 329 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 HKDC1Q2TB90 917 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 OR4C11Q6IEV9 310 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 ABHD17CQ6PCB6 329 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 PAOXQ6QHF9 649 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 ARHGAP22Q7Z5H3 698 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 ZNF285Q96NJ3 590 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 KCNC2Q96PR1 638 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 C17orf62Q9BQA9 187 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 TBCDQ9BTW9 1192 aa21.91■■□□□ 1.1
CPSF4-204ENST00000436336 D6RAR5 112 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 RTCAO00442 366 aaKnown RBP21.9■■□□□ 1.1
CPSF4-204ENST00000436336 ANKRD28O15084 1053 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 KLK1P06870 262 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 PLA2G16P53816 162 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 NME5P56597 212 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 WASHC2DQ5SRD0 308 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 STPG1Q5TH74 334 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 SORBS1Q9BX66 1292 aaKnown RBP21.9■■□□□ 1.1
CPSF4-204ENST00000436336 LHX9Q9NQ69 397 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 CCDC167Q9P0B6 97 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 BAIAP2L1Q9UHR4 511 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 SCN3AQ9NY46 2000 aa21.9■■□□□ 1.1
CPSF4-204ENST00000436336 GNG14A0A1W2PPG7 69 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 SLC22A3O75751 556 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 MSL3P1P0C860 447 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 TACR1P25103 407 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms