RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR8H3Q8N146 312 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 SLC5A11Q8WWX8 675 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 INPP4AQ96PE3 977 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 OR2M4Q96R27 311 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PAK1IP1Q9NWT1 392 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 GRIA1P42261 906 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 SLC3A1Q07837 685 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 GANABQ14697 944 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 USF2Q15853 346 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 AADACL2Q6P093 401 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 TMIGD1Q6UXZ0 262 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 DCDC5Q6ZRR9 648 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CLIP4Q8N3C7 705 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 TRIM43Q96BQ3 446 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 OPA3Q9H6K4 179 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CTPS2Q9NRF8 586 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF451Q9Y4E5 1061 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ST14Q9Y5Y6 855 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 A0A0G2JPF8 293 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 HNRNPCL3B7ZW38 293 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PPM1BO75688 479 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 HNRNPCL4P0DMR1 293 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 TLE3Q04726 772 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF267Q14586 743 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 TEAD2Q15562 447 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CA9Q16790 459 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PLEKHG7Q6ZR37 379 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CILP2Q8IUL8 1156 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PLD5Q8N7P1 536 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 OR9A1PQ8NGU1 263 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 NDRG1Q92597 394 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 NSMAFQ92636 917 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 POLDIP3Q9BY77 421 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 FBRSQ9HAH7 460 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 DKK3Q9UBP4 350 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 FZD10Q9ULW2 581 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 KLHL33A6NCF5 533 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 EFCAB7A8K855 629 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 NPC1O15118 1278 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 DLX3O60479 287 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 RPP30P78346 268 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 SH3YL1Q96HL8 342 aaPredicted RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PKP4Q99569 1192 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 PAPOLGQ9BWT3 736 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 HDHD5Q9BXW7 423 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 KAT8Q9H7Z6 458 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 FZD4Q9ULV1 537 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 SLC16A8O95907 504 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 JUNP05412 331 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 EIF4EP06730 217 aaKnown RBP10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ERVK-8P63133 956 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 ARG2P78540 354 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 RPL13AP3Q6NVV1 102 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CIB1Q99828 191 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 DPAGT1Q9H3H5 408 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 CA14Q9ULX7 337 aa10.85□□□□□ -0.67
SCN4A-201ENST00000435607 MYH11P35749 1972 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 HAS3O00219 553 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 DNM1LO00429 736 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 IFNA4P05014 189 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 BCHEP06276 602 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 CTHP32929 405 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TAS2R40P59535 323 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 CEACAM20Q6UY09 585 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TMED4Q7Z7H5 227 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 DNAJB9Q9UBS3 223 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 CNTN6Q9UQ52 1028 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 SLC2A2P11168 524 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 NR0B1P51843 470 aaKnown RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 PLCXD2Q0VAA5 305 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 DCBLD1Q8N8Z6 715 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 WDR92Q96MX6 357 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 Q9Y3F1 56 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 IGHEP01854 428 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 MYCLP1P12525 358 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 ARL13AQ5H913 290 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 THOC6Q86W42 341 aaKnown RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF440Q8IYI8 595 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TBCCD1Q9NVR7 557 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TLR4O00206 839 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 RRP8O43159 456 aaKnown RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TRAM1Q15629 374 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 KIAA0930Q6ICG6 404 aaPredicted RBP10.84□□□□□ -0.67
SCN4A-201ENST00000435607 ZNF366Q8N895 744 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 GIMAP5Q96F15 307 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 MAGEE1Q9HCI5 957 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 TMEM100Q9NV29 134 aa10.84□□□□□ -0.67
SCN4A-201ENST00000435607 A0A0G2JLL6 359 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms