RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 GPX2P18283 190 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 PRSS53Q2L4Q9 553 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 FBXO43Q4G163 708 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 DEPDC1Q5TB30 811 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 R3HCC1LQ7Z5L2 792 aaKnown RBP18.72■□□□□ 0.59
VRK2-205ENST00000432057 MFSD2AQ8NA29 543 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 TSACCQ96A04 125 aaPredicted RBP18.72■□□□□ 0.59
VRK2-205ENST00000432057 PPCDCQ96CD2 204 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 PHF12Q96QT6 1004 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 DPH2Q9BQC3 489 aaPredicted RBP18.72■□□□□ 0.59
VRK2-205ENST00000432057 ZNF717Q9BY31 904 aaPredicted RBP18.72■□□□□ 0.59
VRK2-205ENST00000432057 NT5DC2Q9H857 520 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 TBC1D29Q9UFV1 150 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 PNMA8BQ9ULN7 279 aaPredicted RBP18.72■□□□□ 0.59
VRK2-205ENST00000432057 VPS4AQ9UN37 437 aa18.72■□□□□ 0.59
VRK2-205ENST00000432057 SEMA3DO95025 777 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 KCNK5O95279 499 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 ZNF23P17027 643 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 MYBPC1Q00872 1141 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 PRDX1Q06830 199 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 MPEG1Q2M385 716 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 NHSL2Q5HYW2 709 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 Q6ZS52 159 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 PTOV1Q86YD1 416 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 ZFP90Q8TF47 636 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 BDH2Q9BUT1 245 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 NTN4Q9HB63 628 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 ATAD3AQ9NVI7 634 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 PDP2Q9P2J9 529 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 SPASTQ9UBP0 616 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 ARHGEF17Q96PE2 2063 aaPredicted RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 UPK1AO00322 258 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 NDUFS4O43181 175 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 LCMT2O60294 686 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 DEAF1O75398 565 aaPredicted RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 C6orf47O95873 294 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 PEBP1P30086 187 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 RPL3P39023 403 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 TXNL4AP83876 142 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 SMAD4Q13485 552 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 VMACQ2NL98 169 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 CCNYL2Q5T2Q4 361 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 CPZQ66K79 652 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 TMEM214Q6NUQ4 689 aaKnown RBP18.71■□□□□ 0.59
VRK2-205ENST00000432057 CARM1Q86X55 608 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 OR10Q1Q8NGQ4 319 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 CCL4L1Q8NHW4 92 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 YY1AP1Q9H869 796 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 AASDHPPTQ9NRN7 309 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 OLAHQ9NV23 265 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 AHSPQ9NZD4 102 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 EBF1Q9UH73 591 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 ZNF639Q9UID6 485 aa18.71■□□□□ 0.59
VRK2-205ENST00000432057 PLOD2O00469 737 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 SERPINB1P30740 379 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 BSGP35613 385 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 HBA1P69905 142 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 C16orf72Q14CZ0 275 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 LRRC23Q53EV4 343 aaPredicted RBP18.7■□□□□ 0.58
VRK2-205ENST00000432057 TBPL2Q6SJ96 375 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 IKBIPQ70UQ0 350 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 GALNT10Q86SR1 603 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 ADGRF3Q8IZF5 1079 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 ST13P4Q8IZP2 240 aaPredicted RBP18.7■□□□□ 0.58
VRK2-205ENST00000432057 TMBIM1Q969X1 311 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 PITHD1Q9GZP4 211 aaPredicted RBP18.7■□□□□ 0.58
VRK2-205ENST00000432057 CHST8Q9H2A9 424 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 SLC6A20Q9NP91 592 aa18.7■□□□□ 0.58
VRK2-205ENST00000432057 ZNF282Q9UDV7 671 aaPredicted RBP18.7■□□□□ 0.58
VRK2-205ENST00000432057 GPR37L1O60883 481 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 PRSS23O95084 383 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 APBB3O95704 486 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 SEMA4FO95754 770 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 LINGO3P0C6S8 592 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 GLULP15104 373 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 LRRC74AQ0VAA2 488 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 ADRM1Q16186 407 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 ERICH5Q6P6B1 374 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 ZNF852Q6ZMS4 543 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 PGBD3Q8N328 593 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 MTERF3Q96E29 417 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 CAAP1Q9H8G2 361 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 MRPS30Q9NP92 439 aaKnown RBP18.69■□□□□ 0.58
VRK2-205ENST00000432057 LHX9Q9NQ69 397 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 SPHK1Q9NYA1 384 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.69■□□□□ 0.58
VRK2-205ENST00000432057 HEBP2Q9Y5Z4 205 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 PRUNE2Q8WUY3 3088 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 MYOCOSA0A1B0GUC4 107 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 PRICKLE3O43900 615 aaPredicted RBP18.69■□□□□ 0.58
VRK2-205ENST00000432057 CCNDBP1O95273 360 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 NTRK1P04629 796 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 SERPIND1P05546 499 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 NUDT7P0C024 238 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 FAM58BPP0C7Q3 252 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 PPIBP23284 216 aaKnown RBP18.69■□□□□ 0.58
VRK2-205ENST00000432057 HTR1BP28222 390 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.69■□□□□ 0.58
VRK2-205ENST00000432057 SLC30A9Q6PML9 568 aa18.69■□□□□ 0.58
VRK2-205ENST00000432057 SYNPOQ8N3V7 929 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms