RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 ISLR2Q6UXK2 745 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 VN1R5Q7Z5H4 357 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 ANKRD37Q7Z713 158 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 ADAMTSL2Q86TH1 951 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 CTAGE3PQ8IX95 158 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 IQCKQ8N0W5 287 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 FAM26EQ8N5C1 309 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 PPM1NQ8N819 430 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 DNAJB14Q8TBM8 379 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 PPP4R1Q8TF05 950 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 NPAS2Q99743 824 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 ILKAPQ9H0C8 392 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-204ENST00000430682 PELI2Q9HAT8 420 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
SMPD4-204ENST00000430682 UTP11Q9Y3A2 253 aaKnown RBP11.8□□□□□ -0.52
SMPD4-204ENST00000430682 DYRK1BQ9Y463 629 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
SMPD4-204ENST00000430682 A0A0G2JN53 185 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 FAM227AF5H4B4 570 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 NDC80O14777 642 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 MAN1A2O60476 641 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 WDR47O94967 919 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 SLC35E2BP0CK96 405 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 CD22P20273 847 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 AHRP35869 848 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 MFSD4BQ5TF39 518 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 FCRLBQ6BAA4 426 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 HIST2H2BCQ6DN03 193 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 CPEB2Q7Z5Q1 589 aaKnown RBP11.79□□□□□ -0.52
SMPD4-204ENST00000430682 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.523e-6■■■■■ 34.1
SMPD4-204ENST00000430682 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
SMPD4-204ENST00000430682 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 LMF1Q96S06 567 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 PHACTR1Q9C0D0 580 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 RAB17Q9H0T7 212 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 RIC8BQ9NVN3 520 aa11.79□□□□□ -0.52
SMPD4-204ENST00000430682 ZNF490Q9ULM2 529 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-204ENST00000430682 COPG1Q9Y678 874 aaKnown RBP11.79□□□□□ -0.52
SMPD4-204ENST00000430682 LRBAP50851 2863 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 BLACEA4D250 179 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 PABPN1LA6NDY0 278 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 E2F3O00716 465 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 KLHL41O60662 606 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 WISP2O76076 250 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 URI1O94763 535 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 GSTA2P09210 222 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 C1GALT1C1LP0DN25 315 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 STMN1P16949 149 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 GGT5P36269 586 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TSFMP43897 325 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 HSPA7P48741 367 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 HNMTP50135 292 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 SLC12A2P55011 1212 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 RAB10P61026 200 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 BTG2P78543 158 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 IRF9Q00978 393 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 CAV1Q03135 178 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 BMPR2Q13873 1038 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 ZNF169Q14929 603 aaPredicted RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 HERC3Q15034 1050 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 RBBP5Q15291 538 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TOR1AIP1Q5JTV8 583 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 GRTP1Q5TC63 336 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 FRA10AC1Q70Z53 315 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 ISCA2Q86U28 154 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 GPSM1Q86YR5 675 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TM9SF4Q92544 642 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 CDKL2Q92772 493 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 MRRFQ96E11 262 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TAAR6Q96RI8 345 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 AIF1LQ9BQI0 150 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 FAM129AQ9BZQ8 928 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 IGSF5Q9NSI5 407 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 NINJ2Q9NZG7 142 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 PTBP2Q9UKA9 531 aaKnown RBP11.78□□□□□ -0.52
SMPD4-204ENST00000430682 KCNE2Q9Y6J6 123 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 CACNA1DQ01668 2161 aa11.78□□□□□ -0.52
SMPD4-204ENST00000430682 TGFBR3LH3BV60 316 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 B4GALT2O60909 372 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 WDPCPO95876 746 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 FHP07954 510 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 ECHS1P30084 290 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-204ENST00000430682 AGTR2P50052 363 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 TNFSF10P50591 281 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 RGS1Q08116 209 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 CDC16Q13042 620 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 RUNX2Q13950 521 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 SLBPQ14493 270 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMPD4-204ENST00000430682 SFT2D3Q587I9 215 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 IRAK1BP1Q5VVH5 260 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 C8orf74Q6P047 294 aa11.77□□□□□ -0.53
SMPD4-204ENST00000430682 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms