RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 TIMD4Q96H15 378 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 ZNF223Q9UK11 482 aaPredicted RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 PPEF2O14830 753 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 RAC2P15153 192 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 TSHRP16473 764 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 FUT4P22083 530 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 CDK16Q00536 496 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 NRF1Q16656 503 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 DGUOKQ16854 277 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 Q7L0L9 218 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 TRIM73Q86UV7 250 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 HSPBAP1Q96EW2 488 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 CASD1Q96PB1 797 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 RBM24Q9BX46 236 aaKnown RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 OXSMQ9NWU1 459 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 PXDNQ92626 1479 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 PIAS1O75925 651 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 TNFSF15O95150 251 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 TACSTD2P09758 323 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 XRCC1P18887 633 aaPredicted RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 DCKP27707 260 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 CHRNA4P43681 627 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 LINGO2Q7L985 606 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 POLDIP3Q9BY77 421 aaKnown RBP12.89□□□□□ -0.35
CDK12-201ENST00000430627 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
CDK12-201ENST00000430627 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 RNH1P13489 461 aaKnown RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 PAQR7Q86WK9 346 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 OR4K14Q8NGD5 310 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ART4Q93070 314 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 BOKQ9UMX3 212 aaPredicted RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 PCDHGB7Q9Y5F8 929 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 CYB5BO43169 146 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ESR1P03372 595 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 MATN1P21941 496 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 OR8B8Q15620 311 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 EARS2Q5JPH6 523 aaKnown RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 MREGQ8N565 214 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZNF548Q8NEK5 533 aaPredicted RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TWIST2Q8WVJ9 160 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 PRRX2Q99811 253 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 G6PC3Q9BUM1 346 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 LUZP4Q9P127 313 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SCML2Q9UQR0 700 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ASTN1O14525 1302 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZNF670-ZNF695F2Z2N8 137 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 FSCN2O14926 492 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SCRG1O75711 98 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 RAD51DO75771 328 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 STK17BO94768 372 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 CLEC3BP05452 202 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 H2BFMP0C1H6 154 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 IL12RB1P42701 662 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 MELKQ14680 651 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 KPNB1Q14974 876 aaKnown RBP12.88□□□□□ -0.35
CDK12-201ENST00000430627 IL17AQ16552 155 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TSTD2Q5T7W7 516 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 FAM180BQ6P0A1 224 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SLC51AQ86UW1 340 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TMEM17Q86X19 198 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 OR9A1PQ8NGU1 263 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZDHHC7Q9NXF8 308 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SCML1Q9UN30 329 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 FEZF1A0PJY2 475 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 OR51F1A6NGY5 319 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TPPPO94811 219 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 BCHEP06276 602 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 L1CAMP32004 1257 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 NKAIN2Q5VXU1 208 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TSSK4Q6SA08 328 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 GK5Q6ZS86 529 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
CDK12-201ENST00000430627 TMEM178AQ8NBL3 297 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms