RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 WISP3O95389 354 aaPredicted RBP16.59■□□□□ 0.25
NUP50-208ENST00000430547 C1GALT1C1LP0DN25 315 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 PHBP35232 272 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 GUCY2DQ02846 1103 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 ELOAQ14241 798 aaKnown RBP16.59■□□□□ 0.25
NUP50-208ENST00000430547 ABRAXAS2Q15018 415 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 NSDHLQ15738 373 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 BTBD16Q32M84 506 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 C18orf21Q32NC0 220 aaPredicted RBP16.59■□□□□ 0.25
NUP50-208ENST00000430547 CDKL4Q5MAI5 379 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
NUP50-208ENST00000430547 SULT1C3Q6IMI6 304 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 KRT78Q8N1N4 520 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 SNX31Q8N9S9 440 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 ANKRD53Q8N9V6 530 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 TTLQ8NG68 377 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 OR5T3Q8NGG3 340 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 CCT6BQ92526 530 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 PRM3Q9NNZ6 103 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 DNAJC11Q9NVH1 559 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 GPRC5BQ9NZH0 403 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
NUP50-208ENST00000430547 COL12A1Q99715 3063 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 LRRK2Q5S007 2527 aa16.59■□□□□ 0.25
NUP50-208ENST00000430547 IGHV3-20A0A0C4DH32 117 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 CLEC18AA5D8T8 446 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 PSMD12O00232 456 aaPredicted RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 STK16O75716 305 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 FAM155BO75949 473 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 C1QAP02745 245 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 FHP07954 510 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 SERPINA6P08185 405 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 CELA2AP08217 269 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 ITGAMP11215 1152 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 CRABP2P29373 138 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 SOX11P35716 441 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 TSFMP43897 325 aaKnown RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 HSPA7P48741 367 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 EFNA3P52797 238 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 RAB8AP61006 207 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 STXBP1P61764 594 aaKnown RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 OLR1P78380 273 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.24
NUP50-208ENST00000430547 NR6A1Q15406 480 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 OR4D1Q15615 310 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 TOR1AIP1Q5JTV8 583 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 ABHD17BQ5VST6 288 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 CLEC18BQ6UXF7 455 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 TMIGD1Q6UXZ0 262 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 ANKRD37Q7Z713 158 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 CLEC18CQ8NCF0 446 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 UTP15Q8TED0 518 aaKnown RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 KIAA1191Q96A73 305 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 TBC1D20Q96BZ9 403 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 FAR2Q96K12 515 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 UBXN10Q96LJ8 280 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 IMMP1LQ96LU5 166 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 MAGEB10Q96LZ2 347 aaPredicted RBP16.58■□□□□ 0.24
NUP50-208ENST00000430547 TMEM79Q9BSE2 394 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 SLC6A16Q9GZN6 736 aa16.58■□□□□ 0.24
NUP50-208ENST00000430547 OR2W5A6NFC9 320 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 MAGEB17A8MXT2 336 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 CHST10O43529 356 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 B3GALT4O96024 378 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 TFEBP19484 476 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 GSTM2P28161 218 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 HPDP32754 393 aaPredicted RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 GGT5P36269 586 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 ZNF33BQ06732 778 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 MRPL49Q13405 166 aaKnown RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 EFTUD2Q15029 972 aaKnown RBP eCLIP16.57■□□□□ 0.242e-7■■■■■ 30.8
NUP50-208ENST00000430547 UAP1Q16222 522 aaPredicted RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 EXT1Q16394 746 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 PDK4Q16654 411 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 FBXO48Q5FWF7 155 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 SLCO4C1Q6ZQN7 724 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 CMC1Q7Z7K0 106 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.57■□□□□ 0.24
NUP50-208ENST00000430547 PDPRQ8NCN5 879 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 OR1N1Q8NGS0 311 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 PRR7Q8TB68 274 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 STAG3L4Q8TBR4 150 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 PSMF1Q92530 271 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 MRRFQ96E11 262 aaKnown RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 LPAR4Q99677 370 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 PITHD1Q9GZP4 211 aaPredicted RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.57■□□□□ 0.249e-7■■■■□ 25.2
NUP50-208ENST00000430547 ALG9Q9H6U8 611 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 CLK4Q9HAZ1 481 aaKnown RBP16.57■□□□□ 0.24
NUP50-208ENST00000430547 NMRAL1Q9HBL8 299 aa16.57■□□□□ 0.24
NUP50-208ENST00000430547 A0A088AWK7 358 aa16.56■□□□□ 0.24
NUP50-208ENST00000430547 ANKDD1BA6NHY2 528 aa16.56■□□□□ 0.24
NUP50-208ENST00000430547 SUPT3HB4E1H0 165 aa16.56■□□□□ 0.24
NUP50-208ENST00000430547 TAPBPO15533 448 aa16.56■□□□□ 0.24
NUP50-208ENST00000430547 CCNT2O60583 730 aaKnown RBP16.56■□□□□ 0.24
NUP50-208ENST00000430547 B4GALT2O60909 372 aa16.56■□□□□ 0.24
NUP50-208ENST00000430547 SUPT3HO75486 399 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms