RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 DLK1P80370 383 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CYBRD1Q53TN4 286 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PRAMEF13Q5VWM6 474 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZER1Q7Z7L7 766 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CDK20Q8IZL9 346 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 MS4A15Q8N5U1 240 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CANT1Q8WVQ1 401 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CLP1Q92989 425 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 FAM198AQ9UFP1 575 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ICKQ9UPZ9 632 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SEC22BO75396 215 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TSPAN8P19075 237 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RAB1AP62820 205 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CTBP1Q13363 440 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TNK1Q13470 666 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 FGFBP1Q14512 234 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CHRNA6Q15825 494 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PTCHD4Q6ZW05 846 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TPRA1Q86W33 373 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC34A3Q8N130 599 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 WNT8BQ93098 351 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 MRIQ9BWK5 157 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SPATC1LQ9H0A9 340 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 UBIAD1Q9Y5Z9 338 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PTCH2Q9Y6C5 1203 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SPATA31C2B4DYI2 1134 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RRASP10301 218 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 GLP1RP43220 463 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 OR1G1P47890 313 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PEX6Q13608 980 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 LRRC26Q2I0M4 334 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DCLRE1AQ6PJP8 1040 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SPRED1Q7Z699 444 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 KLHDC8BQ8IXV7 354 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ADGRF3Q8IZF5 1079 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 GAL3ST3Q96A11 431 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SEMA4BQ9NPR2 832 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 INPP5EQ9NRR6 644 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 INTS6Q9UL03 887 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CST3P01034 146 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 EMP3P54852 163 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 IL2P60568 153 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ACTC1P68032 377 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ACTA1P68133 377 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RAB12Q6IQ22 244 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 B3GALNT2Q8NCR0 500 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HGDQ93099 445 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RTP4Q96DX8 246 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 MED8Q96G25 268 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 P2RY11Q96G91 374 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 COL1A1P02452 1464 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM210A6NLX4 147 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 LINC00032P0C843 101 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 INSRRP14616 1297 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 LSM3P62310 102 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM132BQ14DG7 1078 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SHROOM1Q2M3G4 852 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PTCHD3Q3KNS1 767 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF792Q3KQV3 632 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TEX44Q53QW1 395 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ARL13AQ5H913 290 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PRSS42Q7Z5A4 293 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZBTB46Q86UZ6 589 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF561Q8N587 486 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 OR4K3Q96R72 315 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 NTN4Q9HB63 628 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM82A0PJX8 343 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 C17orf102A2RUQ5 167 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNU1A8MYU2 1149 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CA5AP35218 305 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 KIR3DL1P43629 444 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC11A2P49281 568 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ADAM8P78325 824 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 DACT2Q5SW24 774 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 HIST2H2AA3Q6FI13 130 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 HCAR2Q8TDS4 363 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CNOT9Q92600 299 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 FBXO32Q969P5 355 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 FBXO44Q9H4M3 255 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 PLCXD1Q9NUJ7 323 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ADGRE2Q9UHX3 823 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 TCAF1Q9Y4C2 921 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 QSOX1O00391 747 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 RAMP2O60895 175 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 NAT2P11245 290 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF26P17031 533 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 CD86P42081 329 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 POU4F2Q12837 409 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF177Q13360 481 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 LRRC69Q6ZNQ3 347 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 GPRC5AQ8NFJ5 357 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 MTFMTQ96DP5 389 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-202ENST00000429713 SDCBP2Q9H190 292 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms