RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 PTGFRNQ9P2B2 879 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 RNF112Q9ULX5 631 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 ACOT9Q9Y305 439 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 PCDHGA10Q9Y5H3 936 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 HEATR5BQ9P2D3 2071 aa14.16□□□□□ -0.14
IMP4-204ENST00000428740 CCDC88CQ9P219 2028 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ANKDD1BA6NHY2 528 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 NCF1BA6NI72 391 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 NCF1CA8MVU1 366 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 PSMD12O00232 456 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 CDK2AP1O14519 115 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 CHST10O43529 356 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 JRKO75564 520 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 FHP07954 510 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 LTA4HP09960 611 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 ZNF888P0CJ79 500 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 SMIM10L1P0DMW3 83 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 NCF1P14598 390 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 GDF5P43026 501 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ELOAQ14241 798 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 HIST2H2ACQ16777 129 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 PAGE2BQ5JRK9 111 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ABHD17BQ5VST6 288 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 HIST2H2AA3Q6FI13 130 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ANKRD37Q7Z713 158 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 CUZD1Q86UP6 607 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 SPATA6LQ8N4H0 392 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ANKRD53Q8N9V6 530 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 PDPRQ8NCN5 879 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 M1APQ8TC57 530 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 BRIX1Q8TDN6 353 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 PTCD3Q96EY7 689 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 PEX11GQ96HA9 241 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 SMIM10Q96HG1 83 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 LPAR4Q99677 370 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 BARD1Q99728 777 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 EFCAB11Q9BUY7 163 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 RNF32Q9H0A6 362 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ZDHHC18Q9NUE0 388 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 ASF1BQ9NVP2 202 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 STMN3Q9NZ72 180 aa14.15□□□□□ -0.14
IMP4-204ENST00000428740 PTBP2Q9UKA9 531 aaKnown RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 UBR5O95071 2799 aaPredicted RBP14.15□□□□□ -0.14
IMP4-204ENST00000428740 TNRC6AQ8NDV7 1962 aaKnown RBP14.14□□□□□ -0.15
IMP4-204ENST00000428740 A0A087X1B8 175 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CTAGE15A4D2H0 777 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 SYCE1LA8MT33 242 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 TCP11X1B4DZS4 312 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 TAPBPO15533 448 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CLEC3AO75596 197 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CTAGE8P0CG41 777 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 RNH1P13489 461 aaKnown RBP14.14□□□□□ -0.15
IMP4-204ENST00000428740 SOX11P35716 441 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 TGM3Q08188 693 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 SLMAPQ14BN4 828 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 PDK4Q16654 411 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 FAM83EQ2M2I3 478 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 BTBD16Q32M84 506 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 ISCA2Q86U28 154 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CTAGE6Q86UF2 777 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CTAGE4Q8IX94 777 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 SNX31Q8N9S9 440 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 ARMC2Q8NEN0 867 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CREB3L4Q8TEY5 395 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 UBE2E3Q969T4 207 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 ZNF354BQ96LW1 612 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 MESP1Q9BRJ9 268 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 NPLQ9BXD5 320 aaPredicted RBP14.14□□□□□ -0.15
IMP4-204ENST00000428740 CD244Q9BZW8 370 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 SPNS1Q9H2V7 528 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 ABI3Q9P2A4 366 aa14.14□□□□□ -0.15
IMP4-204ENST00000428740 MYO18BQ8IUG5 2567 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 ESYT3A0FGR9 886 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SYNDIG1LA6NDD5 238 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 PRMT3O60678 531 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 CBX6O95503 412 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SLC35E2BP0CK96 405 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 TFEBP19484 476 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 HNF4AP41235 474 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 HSPA7P48741 367 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 OR4D2P58180 307 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 RAB8AP61006 207 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SNRPNP63162 240 aaKnown RBP14.13□□□□□ -0.15
IMP4-204ENST00000428740 RHAGQ02094 409 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 RCN2Q14257 317 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SLBPQ14493 270 aaKnown RBP eCLIP14.13□□□□□ -0.15
IMP4-204ENST00000428740 ABRAXAS2Q15018 415 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 OR4D1Q15615 310 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 TBCCQ15814 346 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 PRR30Q53SZ7 412 aaPredicted RBP14.13□□□□□ -0.15
IMP4-204ENST00000428740 XKR6Q5GH73 641 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 TOR1AIP1Q5JTV8 583 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 H3F3CQ6NXT2 135 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SIRT6Q8N6T7 355 aa14.13□□□□□ -0.15
IMP4-204ENST00000428740 SRFBP1Q8NEF9 429 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms