RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 GLB1L3Q8NCI6 653 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 OR5D16Q8NGK9 328 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 PATE1Q8WXA2 126 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 REXO5Q96IC2 774 aaKnown RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 MCCC1Q96RQ3 725 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 WFDC6Q9BQY6 131 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 DUSP26Q9BV47 211 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 NPLQ9BXD5 320 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 CPEB1Q9BZB8 566 aaKnown RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 KCNK12Q9HB15 430 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 ITM2CQ9NQX7 267 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 DPP7Q9UHL4 492 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 HCN2Q9UL51 889 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 NCOR1O75376 2440 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 ARHGEF17Q96PE2 2063 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 OR2W5A6NFC9 320 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 EVPLLA8MZ36 301 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 H3BQ06 376 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 FADS2O95864 444 aaKnown RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 IL3P08700 152 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 THRBP10828 461 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 CYP2A6P11509 494 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 MMP12P39900 470 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 BMXP51813 675 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 C21orf59P57076 290 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 RUNDC3AQ59EK9 446 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 CPTPQ5TA50 214 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 BORAQ6PGQ7 559 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 COMMD6Q7Z4G1 85 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 SPRED1Q7Z699 444 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 PATL1Q86TB9 770 aaKnown RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 OR4N5Q8IXE1 308 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 SIMC1Q8NDZ2 872 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 OR9Q2Q8NGE9 314 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 OR8J3Q8NGG0 315 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 NFKBIDQ8NI38 313 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 OSCP1Q8WVF1 389 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 TFGQ92734 400 aaPredicted RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 DNAJA3Q96EY1 480 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 FOPNLQ96NB1 174 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 CCM2Q9BSQ5 444 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 KIF17Q9P2E2 1029 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 IL20RAQ9UHF4 553 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 KCNE2Q9Y6J6 123 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 ZDBF2Q9HCK1 2354 aa8.04□□□□□ -1.12
CD44-208ENST00000428726 SNRNP200O75643 2136 aaKnown RBP8.04□□□□□ -1.12
CD44-208ENST00000428726 M0QX08 132 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 OR1F1O43749 312 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 EFCAB14O75071 495 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 DEAF1O75398 565 aaPredicted RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 RASAL1O95294 804 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 OCM2P0CE71 109 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 OCMP0CE72 109 aaPredicted RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 HSMCR30P0CW71 290 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CHI3L1P36222 383 aaPredicted RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 PRIM2P49643 509 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 OLR1P78380 273 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CD47Q08722 323 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 VITQ6UXI7 678 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 TMEM132CQ8N3T6 1108 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 TMEM145Q8NBT3 493 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 HM13Q8TCT9 377 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 RPL3LQ92901 407 aaKnown RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 ZNF641Q96N77 438 aaPredicted RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 FERD3LQ96RJ6 166 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 C17orf62Q9BQA9 187 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 SLC29A3Q9BZD2 475 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 NKX2-4Q9H2Z4 354 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 WBP1LQ9NX94 342 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 ASIC5Q9NY37 505 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 BAG5Q9UL15 447 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 ABCA7Q8IZY2 2146 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 A0A087WXM4 84 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 LCMT2O60294 686 aaKnown RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 EPN2O95208 641 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 C1orf105O95561 183 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 EIF2S1P05198 315 aaKnown RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 IL6P05231 212 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CISD3P0C7P0 127 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 RAP2AP10114 183 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 GJA4P35212 333 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CAPGP40121 348 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 DCTP40126 519 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CDH12P55289 794 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 RAE1P78406 368 aaKnown RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 TAP2Q03519 686 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 ABHD18Q0P651 414 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CBX3Q13185 183 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 NR1D2Q14995 579 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 SLC36A3Q495N2 470 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 HORMAD1Q86X24 394 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 TCAIMQ8N3R3 496 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 FNDC8Q8TC99 324 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 CLP1Q92989 425 aaKnown RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 USP7Q93009 1102 aa8.03□□□□□ -1.12
CD44-208ENST00000428726 TSACCQ96A04 125 aaPredicted RBP8.03□□□□□ -1.12
CD44-208ENST00000428726 C12orf66Q96MD2 445 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms