RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 OR1F2PQ96R84 312 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 FAM129AQ9BZQ8 928 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 TSPAN10Q9H1Z9 355 aaPredicted RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 KLHL1Q9NR64 748 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 COPG2Q9UBF2 871 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 TEKT2Q9UIF3 430 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 SH3BGRL2Q9UJC5 107 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 ZFP69BQ9UJL9 534 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 NCOA6Q14686 2063 aaPredicted RBP14.57□□□□□ -0.08
SEC13-210ENST00000428626 NPEPPSL1A6NEC2 478 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 PRSS44E7EML9 344 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 FAM227AF5H4B4 570 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ZNHIT1O43257 154 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 B4GALT2O60909 372 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 PIAS1O75925 651 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 NEURL1O76050 574 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SMIM10L1P0DMW3 83 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ZNF37AP17032 561 aaPredicted RBP14.57□□□□□ -0.08
SEC13-210ENST00000428626 HNF4AP41235 474 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 OR4D2P58180 307 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 RAB8AP61006 207 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 MORF4L2Q15014 288 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 OR1C1Q15619 314 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 EXT1Q16394 746 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 MEP1AQ16819 746 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 STRA8Q7Z7C7 330 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ZC3HC1Q86WB0 502 aaKnown RBP14.57□□□□□ -0.08
SEC13-210ENST00000428626 ZNF227Q86WZ6 799 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 CREG2Q8IUH2 290 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ANKMY2Q8IV38 441 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
SEC13-210ENST00000428626 PDIK1LQ8N165 341 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SUN3Q8TAQ9 357 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ELP5Q8TE02 316 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 ANKRD49Q8WVL7 239 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SCMH1Q96GD3 660 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SMIM10Q96HG1 83 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 CAPZA3Q96KX2 299 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 LPAR4Q99677 370 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SLC6A16Q9GZN6 736 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 GTF3C1Q12789 2109 aa14.57□□□□□ -0.08
SEC13-210ENST00000428626 TEP1Q99973 2627 aaKnown RBP14.56□□□□□ -0.08
SEC13-210ENST00000428626 ASPDHA6ND91 283 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 GABRR3A8MPY1 467 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CCL21O00585 134 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 FANCGO15287 622 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 ENO2P09104 434 aaPredicted RBP14.56□□□□□ -0.08
SEC13-210ENST00000428626 MAOAP21397 527 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 SAT1P21673 171 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 IL10P22301 178 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 ITGA8P53708 1063 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 TAS2R39P59534 338 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 ACTN3Q08043 901 aaPredicted RBP14.56□□□□□ -0.08
SEC13-210ENST00000428626 CSHL1Q14406 222 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CDSNQ15517 529 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 C3AR1Q16581 482 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 THOC6Q86W42 341 aaKnown RBP14.56□□□□□ -0.08
SEC13-210ENST00000428626 CEP97Q8IW35 865 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 SLC34A3Q8N130 599 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CREB3L4Q8TEY5 395 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 FRMD6Q96NE9 622 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 MCMBPQ9BTE3 642 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CDCP1Q9H5V8 836 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 NECTIN3Q9NQS3 549 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CORO1CQ9ULV4 474 aaPredicted RBP14.56□□□□□ -0.08
SEC13-210ENST00000428626 PCDHGB6Q9Y5F9 930 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 PDZD2O15018 2839 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 CSMD2Q7Z408 3487 aa14.56□□□□□ -0.08
SEC13-210ENST00000428626 DCHS2Q6V1P9 2916 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 IGKV3D-11A0A0A0MRZ8 115 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 TTI1O43156 1089 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 HNRNPRO43390 633 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 SLC19A2O60779 497 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 SEC31AO94979 1220 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 TCP1P17987 556 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 TNFRSF8P28908 595 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 AHRP35869 848 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 GDF5P43026 501 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 ADORA2A-AS1P86434 159 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 FRG1Q14331 258 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 RNFT1Q5M7Z0 435 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 NXPE4Q6UWF7 544 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 NCCRP1Q6ZVX7 275 aaPredicted RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 GALNTL5Q7Z4T8 443 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 MRGPRGQ86SM5 289 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 TMPRSS11BQ86T26 416 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 SIAH3Q8IW03 269 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 CHERPQ8IWX8 916 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 NFAM1Q8NET5 270 aaPredicted RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 GABPB2Q8TAK5 448 aaPredicted RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 ATL1Q8WXF7 558 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 PTCHD1Q96NR3 888 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 UTP23Q9BRU9 249 aaKnown RBP14.55□□□□□ -0.08
SEC13-210ENST00000428626 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 PELI2Q9HAT8 420 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 SMYD2Q9NRG4 433 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 MOCS1Q9NZB8 636 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 TINAGQ9UJW2 476 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms