RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 VPS37AQ8NEZ2 397 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 GPBAR1Q8TDU6 330 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 CREB3L4Q8TEY5 395 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 FIG4Q92562 907 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 GORASP2Q9H8Y8 452 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 WNT16Q9UBV4 365 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 FBXL21Q9UKT6 434 aa25.35■■□□□ 1.65
LDB1-202ENST00000425280 SPTY2D1-AS1A0A0U1RR47 76 aa25.34■■□□□ 1.65
LDB1-202ENST00000425280 NUDT1P36639 197 aa25.34■■□□□ 1.65
LDB1-202ENST00000425280 CCNYL2Q5T2Q4 361 aa25.34■■□□□ 1.65
LDB1-202ENST00000425280 ZNF551Q7Z340 670 aaPredicted RBP25.34■■□□□ 1.65
LDB1-202ENST00000425280 DPH7Q9BTV6 452 aa25.34■■□□□ 1.65
LDB1-202ENST00000425280 KLF15Q9UIH9 416 aa25.34■■□□□ 1.65
LDB1-202ENST00000425280 CLIC1O00299 241 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 GMNNO75496 209 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 CLEC3AO75596 197 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 CCNDBP1O95273 360 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 IL3P08700 152 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 ENGP17813 658 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 CMPK1P30085 196 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 RPL3P39023 403 aaKnown RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 BCL6P41182 706 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 ABHD18Q0P651 414 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 FZD2Q14332 565 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 MTX3Q5HYI7 312 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 KIAA1614Q5VZ46 1190 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 IKBIPQ70UQ0 350 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 ADGRF3Q8IZF5 1079 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 PAPD5Q8NDF8 572 aaKnown RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 LHX9Q9NQ69 397 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 SNRNP200O75643 2136 aaKnown RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 NUP214P35658 2090 aaPredicted RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 ISM1B1AKI9 464 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 RNASET2O00584 256 aaKnown RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 HAT1O14929 419 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 NDUFS4O43181 175 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 EPN2O95208 641 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 PUS10Q3MIT2 529 aaKnown RBP25.33■■□□□ 1.65
LDB1-202ENST00000425280 ZNF542PQ5EBM4 170 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 TTLQ8NG68 377 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 PPCDCQ96CD2 204 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 PHF12Q96QT6 1004 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 SRMSQ9H3Y6 488 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 ATAD3AQ9NVI7 634 aa25.33■■□□□ 1.65
LDB1-202ENST00000425280 EVPLLA8MZ36 301 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 BTN3A3O00478 584 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 GRK3P35626 688 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 PRRT3Q5FWE3 981 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 IYDQ6PHW0 289 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 PAGE2Q7Z2X7 111 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 UBE3DQ7Z6J8 389 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 ICA1LQ8NDH6 482 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 MTERF3Q96E29 417 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 SHDQ96IW2 340 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 AGPAT4Q9NRZ5 378 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 SPASTQ9UBP0 616 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 V9GYQ6 96 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 CXCR6O00574 342 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 TPST1O60507 370 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 HOXB3P14651 431 aaPredicted RBP25.32■■□□□ 1.64
LDB1-202ENST00000425280 PXNP49023 591 aaPredicted RBP25.32■■□□□ 1.64
LDB1-202ENST00000425280 PRSS53Q2L4Q9 553 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 GPR155Q7Z3F1 870 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 MMP21Q8N119 569 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 SIX5Q8N196 739 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 EME1Q96AY2 570 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 RGMAQ96B86 450 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 REXO5Q96IC2 774 aaKnown RBP25.32■■□□□ 1.64
LDB1-202ENST00000425280 SLC6A18Q96N87 628 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 TAAR2Q9P1P5 351 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 KLHL20Q9Y2M5 609 aa25.32■■□□□ 1.64
LDB1-202ENST00000425280 CAPN5O15484 640 aaPredicted RBP25.31■■□□□ 1.64
LDB1-202ENST00000425280 SCELO95171 688 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 SERPIND1P05546 499 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 ZCCHC18P0CG32 403 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 BMP2P12643 396 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 LRRC74AQ0VAA2 488 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 MPEG1Q2M385 716 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 ANKFN1Q8N957 763 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 SEPHS2Q99611 448 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 CENPKQ9BS16 269 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 GSDMCQ9BYG8 508 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 AICDAQ9GZX7 198 aa25.31■■□□□ 1.64
LDB1-202ENST00000425280 ARHGEF17Q96PE2 2063 aaPredicted RBP25.31■■□□□ 1.64
LDB1-202ENST00000425280 C1orf226A1L170 272 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 CELA2BP08218 269 aaPredicted RBP25.3■■□□□ 1.64
LDB1-202ENST00000425280 GPX2P18283 190 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 MAPK12P53778 367 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 ZIC1Q15915 447 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 ZNF425Q6IV72 752 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 OR4A15Q8NGL6 344 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 PATE1Q8WXA2 126 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 CIDECQ96AQ7 238 aaPredicted RBP25.3■■□□□ 1.64
LDB1-202ENST00000425280 SARGQ9BW04 601 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 LRIT2A6NDA9 550 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 FASP25445 335 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 MAP7Q14244 749 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 SERPINA11Q86U17 422 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 TM4SF18Q96CE8 201 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 KLHDC7BQ96G42 594 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms