RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SNNO75324 88 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 CRCPO75575 148 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 SNUPNO95149 360 aaKnown RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 PDYNP01213 254 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 CAPNS1P04632 268 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 UROSP10746 265 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 RORAP35398 523 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 HTR6P50406 440 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 RPS13P62277 151 aaKnown RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 COL9A2Q14055 689 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 NDUFA9Q16795 377 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 TBC1D25Q3MII6 688 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 SH2D4BQ5SQS7 431 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 KANK2Q63ZY3 851 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF385CQ66K41 422 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 ATG16L1Q676U5 607 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 TTLL10Q6ZVT0 673 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 AFAP1L2Q8N4X5 818 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 ZCCHC10Q8TBK6 192 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 PROKR1Q8TCW9 393 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 DYDC1Q8WWB3 177 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 SELENOMQ8WWX9 145 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF75CPQ92670 426 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 GAL3ST3Q96A11 431 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 MS4A6EQ96DS6 147 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 CLIP3Q96DZ5 547 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 CMTM7Q96FZ5 175 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF578Q96N58 590 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-202ENST00000422991 LRFN5Q96NI6 719 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 SORT1Q99523 831 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 KLHL31Q9H511 634 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 HAO1Q9UJM8 370 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 SLC22A7Q9Y694 548 aa16.16■□□□□ 0.18
COL7A1-202ENST00000422991 A0A1B0GX78 115 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 TMEM233B4DJY2 109 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ULK1O75385 1050 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 FGF4P08620 206 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF888P0CJ79 500 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ZNF33BQ06732 778 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 FAM53BQ14153 422 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 MAP7Q14244 749 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 SGO1Q5FBB7 561 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ABHD13Q7L211 337 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ZFAND4Q86XD8 727 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 DSELQ8IZU8 1212 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 DTWD1Q8N5C7 304 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 GALNT6Q8NCL4 622 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 AGR3Q8TD06 166 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 UTP15Q8TED0 518 aaKnown RBP16.15■□□□□ 0.18
COL7A1-202ENST00000422991 MTFMTQ96DP5 389 aaKnown RBP16.15■□□□□ 0.18
COL7A1-202ENST00000422991 MVB12AQ96EY5 273 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 GBP5Q96PP8 586 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 SLC7A5P2Q9GIP4 190 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 CCDC86Q9H6F5 360 aaKnown RBP16.15■□□□□ 0.18
COL7A1-202ENST00000422991 BRF2Q9HAW0 419 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 TXLNGQ9NUQ3 528 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 THAP1Q9NVV9 213 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 PSD3Q9NYI0 1048 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 ZDHHC2Q9UIJ5 367 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 RAP2CQ9Y3L5 183 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 TRAF6Q9Y4K3 522 aa16.15■□□□□ 0.18
COL7A1-202ENST00000422991 TEX51A0A1B0GUA7 166 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 URADA6NGE7 173 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 STMND1H3BQB6 276 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 FOXS1O43638 330 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ETHE1O95571 254 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 TGFB1P01137 390 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 SMIM10L1P0DMW3 83 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 HSD3B1P14060 373 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ALOX12P18054 663 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ITGAXP20702 1163 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 HSD3B2P26439 372 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 SERPINB3P29508 390 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 OCRLQ01968 901 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 CSTF3Q12996 717 aaKnown RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ABRAXAS2Q15018 415 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 HERC3Q15034 1050 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 UGT3A2Q3SY77 523 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 C1orf189Q5VU69 101 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 KHDRBS2Q5VWX1 349 aaKnown RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 RNF165Q6ZSG1 346 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 PRSS41Q7RTY9 318 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 TIPARPQ7Z3E1 657 aaKnown RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 CLYBLQ8N0X4 340 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF781Q8N8C0 355 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 OR2L5Q8NG80 312 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 FAM76AQ8TAV0 307 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 LRRC8CQ8TDW0 803 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 CKAP2Q8WWK9 683 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 SMIM10Q96HG1 83 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 F2RL3Q96RI0 385 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 HBEGFQ99075 208 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 SERPINI1Q99574 410 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 REXO4Q9GZR2 422 aaKnown RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 ILKAPQ9H0C8 392 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 OR51B5Q9H339 312 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms