RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 CCT6BQ92526 530 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 CCDC126Q96EE4 140 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SMC6Q96SB8 1091 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 IPPKQ9H8X2 491 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 SLC22A11Q9NSA0 550 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 MKS1Q9NXB0 559 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF282Q9UDV7 671 aaPredicted RBP12.67□□□□□ -0.38
TMEM248-203ENST00000418375 TUBD1Q9UJT1 453 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 MID2Q9UJV3 735 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 PCTPQ9UKL6 214 aa12.67□□□□□ -0.38
TMEM248-203ENST00000418375 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 DLX3O60479 287 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 CLEC3AO75596 197 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 NSA2O95478 260 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 PROCP04070 461 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 MYL2P10916 166 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 CD22P20273 847 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 SERPINB1P30740 379 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 CCNG1P51959 295 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 HERVK_113P63132 956 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 CEP85LQ5SZL2 805 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ZYG11AQ6WRX3 759 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 COX15Q7KZN9 410 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 DTWD1Q8N5C7 304 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 OR9A4Q8NGU2 314 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 RDH11Q8TC12 318 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 CREB3L4Q8TEY5 395 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 REPS1Q96D71 796 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 MOCOSQ96EN8 888 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 APOPT1Q96IL0 206 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 YIPF2Q9BWQ6 316 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 C1QTNF3Q9BXJ4 246 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 SLC6A16Q9GZN6 736 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 SLC26A1Q9H2B4 701 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 RHBGQ9H310 441 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 NOL11Q9H8H0 719 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 WDR54Q9H977 334 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ASH1LQ9NR48 2969 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 SENP1Q9P0U3 644 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 TRPC4Q9UBN4 977 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ADGRE2Q9UHX3 823 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 EMCNQ9ULC0 261 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF490Q9ULM2 529 aaPredicted RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 MRPS2Q9Y399 296 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 PTRH2Q9Y3E5 179 aaKnown RBP12.66□□□□□ -0.38
TMEM248-203ENST00000418375 PCDHGA11Q9Y5H2 935 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 SEC16AO15027 2179 aa12.66□□□□□ -0.38
TMEM248-203ENST00000418375 TLN1Q9Y490 2541 aaKnown RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 CDC14CA4D256 554 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 PLIN3O60664 434 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 SUPT7LO94864 414 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 KLHL18O94889 574 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 CLDN9O95484 217 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF888P0CJ79 500 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 PCNAP12004 261 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 ALOX12P18054 663 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 IL1RNP18510 177 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 IMPDH1P20839 514 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 PRKAA2P54646 552 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 PHEXP78562 749 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 SSPNQ14714 243 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 NKG7Q16617 165 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 UGT8Q16880 541 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 TOR1AIP1Q5JTV8 583 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF678Q5SXM1 525 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 LAS2Q8IYD9 372 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 BANPQ8N9N5 519 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 L3MBTL4Q8NA19 623 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 OR2Y1Q8NGV0 311 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 THAP4Q8WY91 577 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 MIEF2Q96C03 454 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 MAGEB10Q96LZ2 347 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 MKKSQ9NPJ1 570 aaPredicted RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 C14orf105Q9NVL8 296 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 CTSFQ9UBX1 484 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 POLHQ9Y253 713 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 NAALAD2Q9Y3Q0 740 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 MAP4K5Q9Y4K4 846 aa12.65□□□□□ -0.38
TMEM248-203ENST00000418375 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
TMEM248-203ENST00000418375 A0A088AWK7 358 aa12.64□□□□□ -0.39
TMEM248-203ENST00000418375 VSTM2BA6NLU5 285 aa12.64□□□□□ -0.39
TMEM248-203ENST00000418375 SGK494L7N484 410 aa12.64□□□□□ -0.39
TMEM248-203ENST00000418375 OR7A17O14581 309 aa12.64□□□□□ -0.39
TMEM248-203ENST00000418375 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
TMEM248-203ENST00000418375 KLF7O75840 302 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms