RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 PSMA3P25788 255 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 CRTC1Q6UUV9 634 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 OR4E2Q8NGC2 313 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 BPIP17213 487 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 PRKACGP22612 351 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 WSCD2Q2TBF2 565 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 CCDC28AQ8IWP9 274 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 SLC15A4Q8N697 577 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
SCAF8-203ENST00000417268 NT5C3BQ969T7 300 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 CGREF1Q99674 301 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 EBPLQ9BY08 206 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 CPEB1Q9BZB8 566 aaKnown RBP12.39□□□□□ -0.43
SCAF8-203ENST00000417268 FBRSL1Q9HCM7 1045 aaKnown RBP12.39□□□□□ -0.43
SCAF8-203ENST00000417268 MKLN1Q9UL63 735 aa12.39□□□□□ -0.43
SCAF8-203ENST00000417268 MYO7AQ13402 2215 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 XPNPEP2O43895 674 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 RLN1P04808 185 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SHMT2P34897 504 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ARSDP51689 593 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 PRR5P85299 388 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 TOMM20Q15388 145 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 C11orf65Q8NCR3 313 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 XAGE5Q8WWM1 108 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 NXPE3Q969Y0 559 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 TP53INP1Q96A56 240 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 CMTM7Q96FZ5 175 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 TUBA1CQ9BQE3 449 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 POLR2J2Q9GZM3 115 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SMURF2Q9HAU4 748 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 RC3H2Q9HBD1 1191 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 HSPB11Q9Y547 144 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 MPZL2O60487 215 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SORBS2O94875 1100 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ITGB7P26010 798 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 PTX3P26022 381 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 CLCN2P51788 898 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ALG11Q2TAA5 492 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 RPS27LQ71UM5 84 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ART5Q96L15 291 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ZNF778Q96MU6 729 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 CDK15Q96Q40 435 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 PRDM8Q9NQV8 689 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SDK1Q7Z5N4 2213 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 PCDH7O60245 1069 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ALDOAP04075 364 aaKnown RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 GJA4P35212 333 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 KDELC1Q6UW63 502 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 CBARPQ8N350 705 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 ZUFSPQ96AP4 578 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 RGMAQ96B86 450 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 AURKBQ96GD4 344 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SLC22A12Q96S37 553 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
SCAF8-203ENST00000417268 MKL2Q9ULH7 1088 aa12.38□□□□□ -0.43
SCAF8-203ENST00000417268 SLC16A5O15375 505 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 HOXD9P28356 352 aaPredicted RBP12.37□□□□□ -0.43
SCAF8-203ENST00000417268 CSNK1DP48730 415 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 DCDC1P59894 354 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 PIGFQ07326 219 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 NFATC3Q12968 1075 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 CXorf57Q6NSI4 855 aaKnown RBP12.37□□□□□ -0.43
SCAF8-203ENST00000417268 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 ZDHHC14Q8IZN3 488 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 ZBED6CLQ96FA7 236 aaPredicted RBP12.37□□□□□ -0.43
SCAF8-203ENST00000417268 TMEM246Q9BRR3 403 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 C11orf16Q9NQ32 467 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 EQTNQ9NQ60 294 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 EIF3KQ9UBQ5 218 aaKnown RBP12.37□□□□□ -0.43
SCAF8-203ENST00000417268 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 BMP7P18075 431 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 HLA-FP30511 346 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
SCAF8-203ENST00000417268 NUDT6P53370 316 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 NADSYN1Q6IA69 706 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 PHC2Q8IXK0 858 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 CCDC36Q8IYA8 594 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 TRPS1Q9UHF7 1281 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 UGT2B17O75795 530 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 PRPS1L1P21108 318 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 CD97P48960 835 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 DGKQP52824 942 aa12.37□□□□□ -0.43
SCAF8-203ENST00000417268 SLC14A2Q15849 920 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms