RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 HLA-DQB2P05538 268 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 ATXN1LP0C7T5 689 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 KRT10P13645 584 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CCNB1P14635 433 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BRAFP15056 766 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CTNNA2P26232 953 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SERPINA4P29622 427 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MMP12P39900 470 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MDH1P40925 334 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 ATXN3P54252 364 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 ALDH18A1P54886 795 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SUMO3P55854 103 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 GNG11P61952 73 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 VSNL1P62760 191 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 RPS21P63220 83 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BCL2L1Q07817 233 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 AP1B1Q10567 949 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 TRAF2Q12933 501 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BNIP1Q12981 228 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 HNRNPDQ14103 355 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 TFDP2Q14188 446 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PDK1Q15118 436 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 KIF19Q2TAC6 998 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 P3H1Q32P28 736 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FAM153CQ494X1 144 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SETMARQ53H47 684 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PLAC9Q5JTB6 97 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FAM182AQ5T1J6 154 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 TEDDM1Q5T9Z0 273 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MARC1Q5VT66 337 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PAPD7Q5XG87 772 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 NAPEPLDQ6IQ20 393 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 NEK5Q6P3R8 708 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BRAT1Q6PJG6 821 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CORO6Q6QEF8 472 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BBS12Q6ZW61 710 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PEX26Q7Z412 305 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PRPF39Q86UA1 669 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 NT5DC3Q86UY8 548 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 RCOR2Q8IZ40 523 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SYCE1Q8N0S2 351 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 BBS5Q8N3I7 341 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FAM109AQ8N4B1 249 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MINDY1Q8N5J2 469 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 TEX26Q8N6G2 289 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CCNYQ8ND76 341 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 EXD1Q8NHP7 514 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FNDC8Q8TC99 324 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 HCAR2Q8TDS4 363 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 AGAP11Q8TF27 550 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 ECHDC3Q96DC8 303 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FEM1CQ96JP0 617 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PBKQ96KB5 322 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 ZNF641Q96N77 438 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SLC46A1Q96NT5 459 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MOGAT1Q96PD6 335 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 NUDCD1Q96RS6 583 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SEMA3CQ99985 751 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 HERPUD2Q9BSE4 406 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 OSBPL8Q9BZF1 889 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 POLR1EQ9GZS1 481 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CPNE5Q9HCH3 593 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 XAB2Q9HCS7 855 aaKnown RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 FZD3Q9NPG1 666 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PPP1R14DQ9NXH3 145 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CPNE7Q9UBL6 633 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 POLG2Q9UHN1 485 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 AMFRQ9UKV5 643 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 GUCA1BQ9UMX6 200 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 PACSIN2Q9UNF0 486 aaPredicted RBP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CHMP2BQ9UQN3 213 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 CFL2Q9Y281 166 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 LRP4O75096 1905 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 MYLKQ15746 1914 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 COL6A6A6NMZ7 2263 aa4.74□□□□□ -1.65
ATG4AP1-201ENST00000416893 SCN8AQ9UQD0 1980 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 MIF4GDA9UHW6 222 aaKnown RBP4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 TMEM114B3SHH9 223 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 PRAMEF26H0Y7S4 382 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 APOC4-APOC2K7ER74 178 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 NDC80O14777 642 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 VILLO15195 856 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 SLC22A1O15245 554 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 RAD51BO15315 384 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 KRT86O43790 486 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 OXSR1O95747 527 aaPredicted RBP4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 CER1O95813 267 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 PAHP00439 452 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 JCHAINP01591 159 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 APOC2P02655 101 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 MMP2P08253 660 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 PABPC4LP0CB38 370 aaKnown RBP4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 NAGAP17050 411 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 VCLP18206 1134 aa4.73□□□□□ -1.65
ATG4AP1-201ENST00000416893 GNAZP19086 355 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms