RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 COX6B1P14854 86 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 PTGER4P35408 488 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 OLR1P78380 273 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 CSHL1Q14406 222 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
PAF1-202ENST00000416728 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 ABHD13Q7L211 337 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 GDF7Q7Z4P5 450 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 GALNTL5Q7Z4T8 443 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 SLC5A11Q8WWX8 675 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 FBXL8Q96CD0 374 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 FRMD6Q96NE9 622 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 OSBPL9Q96SU4 736 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 CDCP1Q9H5V8 836 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 LRFN1Q9P244 771 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 ZFP69BQ9UJL9 534 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 NPIPA1Q9UND3 350 aa13.56□□□□□ -0.24
PAF1-202ENST00000416728 DNALI1O14645 258 aaPredicted RBP13.55□□□□□ -0.24
PAF1-202ENST00000416728 B4GALT2O60909 372 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 NEURL1O76050 574 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 GUCA1CO95843 209 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 B3GALT4O96024 378 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 SP1P08047 785 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 ENO2P09104 434 aaPredicted RBP13.55□□□□□ -0.24
PAF1-202ENST00000416728 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
PAF1-202ENST00000416728 SCTRP47872 440 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 SMSP52788 366 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 BBS9Q3SYG4 887 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 MSS51Q4VC12 460 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 HECTD2Q5U5R9 776 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 MYO7BQ6PIF6 2116 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 RPS19BP1Q86WX3 136 aaKnown RBP13.55□□□□□ -0.24
PAF1-202ENST00000416728 SPPL2CQ8IUH8 684 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 KIF2BQ8N4N8 673 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 NT5CQ8TCD5 201 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 ELP5Q8TE02 316 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 NEIL2Q969S2 332 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 SLC17A6Q9P2U8 582 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
PAF1-202ENST00000416728 ZNF835Q9Y2P0 537 aa13.55□□□□□ -0.24
PAF1-202ENST00000416728 URADA6NGE7 173 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 CDK2AP1O14519 115 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PRMT3O60678 531 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 DNAJB6O75190 326 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 SLC25A12O75746 678 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 SNRPB2P08579 225 aaKnown RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 AGAP20933 346 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 AHRP35869 848 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 HNF4AP41235 474 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PGGT1BP53609 377 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 MAPKAPK3Q16644 382 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 TEDDM1Q5T9Z0 273 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 FAM45BPQ6NSW5 357 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 Q6ZPB1 254 aaPredicted RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 IGDCC3Q8IVU1 814 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 FAM45AQ8TCE6 357 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 UTP15Q8TED0 518 aaKnown RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 TSNARE1Q96NA8 513 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PHF12Q96QT6 1004 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
PAF1-202ENST00000416728 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 DYRK1BQ9Y463 629 aa13.54□□□□□ -0.24
PAF1-202ENST00000416728 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
PAF1-202ENST00000416728 ASNA1O43681 348 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 ABOP16442 354 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 ZNF24P17028 368 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 TPP2P29144 1249 aaPredicted RBP13.53□□□□□ -0.24
PAF1-202ENST00000416728 CYB561P49447 251 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 RAB8AP61006 207 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 BTG2P78543 158 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 REEP5Q00765 189 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 SBSNQ6UWP8 590 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 TMPRSS11BQ86T26 416 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 SIAH3Q8IW03 269 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 PDIK1LQ8N165 341 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 TRPV3Q8NET8 790 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 OLFM1Q99784 485 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 AIF1LQ9BQI0 150 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 PELI2Q9HAT8 420 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 GPAMQ9HCL2 828 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 MEMO1Q9Y316 297 aa13.53□□□□□ -0.24
PAF1-202ENST00000416728 SAGE2PA6NJ88 616 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 CES2O00748 559 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 NME2P1O60361 137 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 RNH1P13489 461 aaKnown RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 MAOAP21397 527 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms