RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ODF4Q2M2E3 257 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 LCN8Q6JVE9 175 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 C16orf70Q9BSU1 422 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 MS4A12Q9NXJ0 267 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 MARK1Q9P0L2 795 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TLR6Q9Y2C9 796 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 C5orf51A6NDU8 294 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 BCKDHAP12694 445 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 SHMT2P34897 504 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 AP1S1P61966 158 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 PTGES3Q15185 160 aaKnown RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 AQP11Q8NBQ7 271 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM125Q96AQ2 219 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 EFHD2Q96C19 240 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF599Q96NL3 588 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 DERL2Q9GZP9 239 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 NANSQ9NR45 359 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 GPR83Q9NYM4 423 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF282Q9UDV7 671 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ALPPL2P10696 532 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 CLK3P49761 638 aaKnown RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 CLCN2P51788 898 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ARHGDIBP52566 201 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 TUBA3CQ13748 450 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 GPR68Q15743 365 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ALG11Q2TAA5 492 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 LARP4Q71RC2 724 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 KLHL6Q8WZ60 621 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 IMP4Q96G21 291 aaKnown RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 SLC30A2Q9BRI3 323 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 WDR6Q9NNW5 1121 aaKnown RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 A0A096LPI6 279 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ACOT8O14734 319 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 BCHEP06276 602 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 KLK1P06870 262 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 HTR1EP28566 365 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 C21orf33P30042 268 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 SP140Q13342 867 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 TUBB3Q13509 450 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 COX18Q8N8Q8 333 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ZFP41Q8N8Y5 198 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 SRFBP1Q8NEF9 429 aaKnown RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 NFKBIDQ8NI38 313 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 LCN9Q8WX39 176 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 CCDC120Q96HB5 630 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 EXO5Q9H790 373 aa12.48□□□□□ -0.41
SCN1B-202ENST00000415950 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-202ENST00000415950 H0YAE9 185 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 MANBAO00462 879 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 RFPL2O75678 378 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 POP4O95707 220 aaKnown RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 FUCA1P04066 466 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 HSD17B1P14061 328 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 GADD45AP24522 165 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ACSL1P33121 698 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 DCTP40126 519 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ABHD18Q0P651 414 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 TOMM5Q8N4H5 51 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF676Q8N7Q3 588 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 OR2L3Q8NG85 312 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ACDQ96AP0 544 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZBED6CLQ96FA7 236 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SH3YL1Q96HL8 342 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 FEVQ99581 238 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 B3GNT4Q9C0J1 378 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 CST11Q9H112 138 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ABCB8Q9NUT2 735 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 MEN1O00255 615 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 PROZP22891 400 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 PGDP52209 483 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 FOXM1Q08050 763 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SELPLGQ14242 412 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF675Q8TD23 568 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SGCDQ92629 289 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 COQ8BQ96D53 544 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 TOXO94900 526 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms