RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 AP2B1P63010 937 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 MAT1AQ00266 395 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TIAL1Q01085 375 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 GARNL3Q5VVW2 1013 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 FRA10AC1Q70Z53 315 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 SPPL2CQ8IUH8 684 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 CTAGE3PQ8IX95 158 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 LRRC56Q8IYG6 542 aaPredicted RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 THAP3Q8WTV1 239 aaPredicted RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 MVB12AQ96EY5 273 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TSPAN17Q96FV3 270 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 PDLIM5Q96HC4 596 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 C16orf45Q96MC5 204 aaPredicted RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 SIGLEC12Q96PQ1 595 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 EGFL8Q99944 293 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TUBB6Q9BUF5 446 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TGIF2Q9GZN2 237 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 PLAC1Q9HBJ0 212 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 KLHL1Q9NR64 748 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 A0A0A6YYC8 382 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 I3L1I5 382 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 FOXS1O43638 330 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 SEC24DO94855 1032 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 ENO2P09104 434 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 GSTA2P09210 222 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 C8orf89P0DMQ9 161 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 CCR8P51685 355 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 ALDH6A1Q02252 535 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 CSHL1Q14406 222 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 USP10Q14694 798 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 PHKG1Q16816 387 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 BTBD16Q32M84 506 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNF425Q6IV72 752 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 PLD3Q8IV08 490 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 SHISA5Q8N114 240 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 CAMKVQ8NCB2 501 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 OLFM1Q99784 485 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 SPOCK3Q9BQ16 436 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 MCCC2Q9HCC0 563 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 GPAMQ9HCL2 828 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 ANKRD10Q9NXR5 420 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 CTNNAL1Q9UBT7 734 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 PSAT1Q9Y617 370 aa12.47□□□□□ -0.41
CTHRC1-202ENST00000415886 KCNE1BA0A087WTH5 132 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 IGKV1-8A0A0C4DH67 115 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 NPIPA5E9PKD4 350 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 HAT1O14929 419 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 TP73O15350 636 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 P2RX6O15547 441 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 TUBB4AP04350 444 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 MAGEA4P43358 317 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 PGGT1BP53609 377 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 TAS2R39P59534 338 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 CSNK1G2P78368 415 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 HSF1Q00613 529 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 POU4F1Q01851 419 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 CBLBQ13191 982 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 TUBA3CQ13748 450 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 ACER2Q5QJU3 275 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 TUBA3EQ6PEY2 450 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 LCTLQ6UWM7 567 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 C3P1Q6ZMU1 363 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 MEX3BQ6ZN04 569 aaKnown RBP12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 MBOAT1Q6ZNC8 495 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 CYS1Q717R9 158 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 AGAP11Q8TF27 550 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 ANKRD7Q92527 254 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 PYCR2Q96C36 320 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 FRMD6Q96NE9 622 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 CPNE1Q99829 537 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 WDR83Q9BRX9 315 aaKnown RBP12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 FAM129AQ9BZQ8 928 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 DRC3Q9H069 523 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 ENKD1Q9H0I2 346 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 GRHL1Q9NZI5 618 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 NPIPA1Q9UND3 350 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
CTHRC1-202ENST00000415886 ASPDHA6ND91 283 aa12.45□□□□□ -0.42
CTHRC1-202ENST00000415886 MAN1A2O60476 641 aa12.45□□□□□ -0.42
CTHRC1-202ENST00000415886 H2AFYO75367 372 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms