RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 A0A088AWK7 358 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 TMEM114B3SHH9 223 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 NPIPB8E9PQR5 432 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 AGRPO00253 132 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 PPP6CO00743 305 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 GALR3O60755 368 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 MED26O95402 600 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 SERPINE1P05121 402 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 FGF4P08620 206 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 ZNF10P21506 573 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 GRK2P25098 689 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 TGM3Q08188 693 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 RCN2Q14257 317 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 RBBP7Q16576 425 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 CPSF6Q16630 551 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 RPS27LQ71UM5 84 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 SYVN1Q86TM6 617 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 NUDCD3Q8IVD9 361 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 KCT2Q8NC54 265 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 OR2L5Q8NG80 312 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 SNRNP27Q8WVK2 155 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 NACC2Q96BF6 587 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 MOCOSQ96EN8 888 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 CMTM7Q96FZ5 175 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 MECRQ9BV79 373 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 ROGDIQ9GZN7 287 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 REXO4Q9GZR2 422 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 SLC22A11Q9NSA0 550 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 STARD5Q9NSY2 213 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 DHCR7Q9UBM7 475 aaKnown RBP11.32□□□□□ -0.6
ATG4B-207ENST00000415107 HAO1Q9UJM8 370 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 KCND3Q9UK17 655 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 SNX6Q9UNH7 406 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
ATG4B-207ENST00000415107 VSTM2BA6NLU5 285 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 C9J4A7 227 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 TAF4O00268 1085 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KLF11O14901 512 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 RRP8O43159 456 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 OR4F21O95013 312 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KRT6AP02538 564 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KRT6BP04259 564 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 IL10P22301 178 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 PTX3P26022 381 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 AVPR1BP47901 424 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KRT6CP48668 564 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 UCNP55089 124 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 CSTF3Q12996 717 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 IFT88Q13099 833 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 NCF4Q15080 339 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 DEPDC1Q5TB30 811 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KHDRBS2Q5VWX1 349 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 ADNP2Q6IQ32 1131 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 ABHD17CQ6PCB6 329 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 CHSY3Q70JA7 882 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 COX15Q7KZN9 410 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 IL22RA1Q8N6P7 574 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 CCNYL1Q8N7R7 359 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 GBP7Q8N8V2 638 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 METTL2AQ96IZ6 378 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KCNC2Q96PR1 638 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 CENPKQ9BS16 269 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 NPLQ9BXD5 320 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 CHST8Q9H2A9 424 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 ELOVL6Q9H5J4 265 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 EML4Q9HC35 981 aaKnown RBP11.31□□□□□ -0.6
ATG4B-207ENST00000415107 ANKHQ9HCJ1 492 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 ZNF304Q9HCX3 659 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 KCNK9Q9NPC2 374 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 NKIRAS1Q9NYS0 192 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 PADI2Q9Y2J8 665 aa11.31□□□□□ -0.6
ATG4B-207ENST00000415107 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 TEX51A0A1B0GUA7 166 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 MAGEB17A8MXT2 336 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 C4orf51C9J302 202 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 PCDH17O14917 1159 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 KLHL18O94889 574 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 UROSP10746 265 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CYP4F2P78329 520 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 TLE3Q04726 772 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CUZD1Q86UP6 607 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 MYLK4Q86YV6 388 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms