RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 Q6ZVU0 165 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 ADCK1Q86TW2 530 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 KLHDC8AQ8IYD2 350 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 RASGEF1AQ8N9B8 481 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 HUS1BQ8NHY5 278 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 CDC26Q8NHZ8 85 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 WDR48Q8TAF3 677 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 CSGALNACT1Q8TDX6 532 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 Q96MT0 163 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 PKP4Q99569 1192 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 APOL4Q9BPW4 351 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 DOHHQ9BU89 302 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 ZDHHC6Q9H6R6 413 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 FBXL12Q9NXK8 326 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 BTNL2Q9UIR0 455 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
SS18-203ENST00000415083 PCYT1BQ9Y5K3 369 aaPredicted RBP9.48□□□□□ -0.89
SS18-203ENST00000415083 EIF3FO00303 357 aaPredicted RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 MYO1DO94832 1006 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SLC16A8O95907 504 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 IGSF6O95976 241 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SOD2P04179 222 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SERPINA4P29622 427 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GRK3P35626 688 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TBCEQ15813 527 aaPredicted RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 PLEKHS1Q5SXH7 462 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 LIPJQ5W064 366 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TTC23LQ6PF05 361 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 Q6ZVL8 140 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 PARP16Q8N5Y8 322 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GPR156Q8NFN8 814 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 OR7G3Q8NG95 312 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SKA2Q8WVK7 121 aaPredicted RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 HTRA1Q92743 480 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 NEIL2Q969S2 332 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 ZHX1-C8orf76Q96EF9 292 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 REEP1Q9H902 201 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 C1GALT1Q9NS00 363 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 ACER3Q9NUN7 267 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 RPS6KA6Q9UK32 745 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 EVPLLA8MZ36 301 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TBX1O43435 398 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TSPAN6O43657 245 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 B4GALT2O60909 372 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 CNOT3O75175 753 aaKnown RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 PABPC1P11940 636 aaKnown RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 SEPHS1P49903 392 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 METAP1P53582 386 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 PCDH1Q08174 1060 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 RAB33AQ14088 237 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 PUM1Q14671 1186 aaKnown RBP eCLIP9.47□□□□□ -0.89
SS18-203ENST00000415083 LRIT3Q3SXY7 679 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GRHL2Q6ISB3 625 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 COMTD1Q86VU5 262 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TMEM25Q86YD3 366 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 CYP4Z2PQ8N1L4 340 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 OR2A12Q8NGT7 310 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 MCFD2Q8NI22 146 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TP53INP1Q96A56 240 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 CCM2Q9BSQ5 444 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 ABCB10Q9NRK6 738 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 ATAD3AQ9NVI7 634 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SCN3BQ9NY72 215 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SAP18O00422 153 aaKnown RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 AIREO43918 545 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GSTM1P09488 218 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 POU2F1P14859 743 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 PTPN5P54829 565 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 RPS13P62277 151 aaKnown RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 IRF8Q02556 426 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 NAE1Q13564 534 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TIGD6Q17RP2 521 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 ZNF404Q494X3 552 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 VN1R5Q7Z5H4 357 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 LACC1Q8IV20 430 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 TCAIMQ8N3R3 496 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 GOT1L1Q8NHS2 421 aaPredicted RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 ZNF675Q8TD23 568 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 IPCEF1Q8WWN9 437 aaPredicted RBP9.47□□□□□ -0.89
SS18-203ENST00000415083 SORCS1Q8WY21 1168 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 SLC6A18Q96N87 628 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 FTSJ1Q9UET6 329 aa9.47□□□□□ -0.89
SS18-203ENST00000415083 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 KMOO15229 486 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 SLC16A5O15375 505 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 SPINT1O43278 529 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 PRMT3O60678 531 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 MRPS14O60783 128 aaKnown RBP9.46□□□□□ -0.89
SS18-203ENST00000415083 LILRB3O75022 631 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 AOC2O75106 756 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 OR56A5P0C7T3 313 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 TGM4P49221 684 aa9.46□□□□□ -0.89
SS18-203ENST00000415083 TPTEP56180 551 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms