RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TSFMP43897 325 aaKnown RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 LBX1P52954 281 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 XGP55808 180 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 IRX4P78413 519 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 CDH18Q13634 790 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 TMEM132DQ14C87 1099 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 FUT10Q6P4F1 479 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 CYB5D1Q6P9G0 228 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 MSANTD1Q6ZTZ1 278 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 GALNTL5Q7Z4T8 443 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRUNE1Q86TP1 453 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 CATSPERDQ86XM0 798 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 GBP7Q8N8V2 638 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 CCDC63Q8NA47 563 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 RIT1Q92963 219 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 C2orf48Q96LS8 159 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 AK8Q96MA6 479 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 CITED2Q99967 270 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 OVOL2Q9BRP0 275 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 UBQLN3Q9H347 655 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 MTHFD2LQ9H903 347 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 PANK4Q9NVE7 773 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 POMT1Q9Y6A1 747 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 RTEL1-TNFRSF6BF6WH68 1400 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 ANKRD30AQ9BXX3 1397 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 ABCC3O15438 1527 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 ASXL1Q8IXJ9 1541 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 TCF20Q9UGU0 1960 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 IGKV3D-15A0A087WSY6 115 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 A0A0B4J203 849 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRBV4-1A0A0J9YWV2 114 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 MEX3AA1L020 520 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 KPNA7A9QM74 516 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 NPIPA3F8WFD2 350 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 H7C423 109 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 MOCS2O96007 188 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 IGHEP01854 428 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZSCAN5DPP0CG00 497 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 KRT3P12035 628 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 LBPP18428 481 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 RBMS1P29558 406 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRKCIP41743 596 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 CLDN17P56750 224 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 HILS1P60008 231 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 ROR1Q01973 937 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 FASTKD1Q53R41 847 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 MPP7Q5T2T1 576 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 TTC27Q6P3X3 843 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 FRRS1Q6ZNA5 592 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 DZIP1Q86YF9 867 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR4D10Q8NGI6 311 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF519Q8TB69 540 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 GRK7Q8WTQ7 553 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 DNASE1L2Q92874 299 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 MR1Q95460 341 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 RBM41Q96IZ5 413 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 FAM218AQ96MZ4 157 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 ADPGKQ9BRR6 497 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRIM51Q9BSJ1 452 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 MLPHQ9BV36 600 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 C10orf88Q9H8K7 445 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 RNF121Q9H920 327 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 EXOC1Q9NV70 894 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 AGTPBP1Q9UPW5 1226 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 WIPI2Q9Y4P8 454 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 CSNK1G3Q9Y6M4 447 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 CLTCQ00610 1675 aaKnown RBP3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 QRICH2Q9H0J4 1663 aa3.23□□□□□ -1.89
HMGB1P11-201ENST00000413899 NRXN3Q9Y4C0 1643 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NEO1Q92859 1461 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 MLH3Q9UHC1 1453 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 ANKRD26Q9UPS8 1709 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 PTPRTO14522 1441 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRAV18A0A075B6X5 111 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NKX6-3A6NJ46 265 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRSS46E5RG02 174 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 SELENOFO60613 162 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 CYTIPO60759 359 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 DUS4LO95620 317 aaKnown RBP3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRIM49P0CI25 452 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRIM49CP0CI26 452 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 GLULP15104 373 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 UGT1A4P22310 534 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRKACGP22612 351 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 KRT2P35908 639 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 MTF1Q14872 753 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 MTHFSDQ2M296 383 aaKnown RBP3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 FGD3Q5JSP0 725 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 HECTD3Q5T447 861 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR4C11Q6IEV9 310 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 METTL7BQ6UX53 244 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 KIF6Q6ZMV9 814 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 FAM47EQ6ZV65 393 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 LRRTM1Q86UE6 522 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRSS33Q8NF86 280 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 NUP37Q8NFH4 326 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR4C15Q8NGM1 316 aa3.22□□□□□ -1.89
HMGB1P11-201ENST00000413899 CHURC1Q8WUH1 139 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms