RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RSPRY1Q96DX4 576 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ZC3H10Q96K80 434 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MRGPRX3Q96LB0 322 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 COQ10AQ96MF6 247 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 CCDC115Q96NT0 180 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PKP4Q99569 1192 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 BRINP2Q9C0B6 783 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ZSWIM8A7E2V4 1837 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TSPAN11A1L157 253 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 TMX2-CTNND1H3BSU7 103 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 SEC24DO94855 1032 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-211ENST00000413186 UBXN7O94888 489 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 SLC6A2P23975 617 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 CHN2P52757 468 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 CTSL3PQ5NE16 218 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 OLFML2AQ68BL7 652 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 GK5Q6ZS86 529 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 ITFG2Q969R8 447 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 IL17FQ96PD4 163 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 EBPLQ9BY08 206 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 MRPL39Q9NYK5 338 aaKnown RBP8.21□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF282Q9UDV7 671 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-211ENST00000413186 PPIL1Q9Y3C6 166 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 PRSS21Q9Y6M0 314 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 AQP9O43315 295 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 NARSO43776 548 aaKnown RBP8.21□□□□□ -1.09
SYNE1-211ENST00000413186 S100A2P29034 98 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 ACTR3P61158 418 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 COPZ1P61923 177 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 SLC13A2Q13183 592 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 DOC2AQ14183 400 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 TCTE1Q5JU00 501 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 LCTLQ6UWM7 567 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 TSPEARQ8WU66 669 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 GABRG3Q99928 467 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 REXO4Q9GZR2 422 aaKnown RBP8.21□□□□□ -1.09
SYNE1-211ENST00000413186 PRDM8Q9NQV8 689 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 CALML5Q9NZT1 146 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 TMEM5Q9Y2B1 443 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 CARD8Q9Y2G2 431 aa8.21□□□□□ -1.09
SYNE1-211ENST00000413186 ARHGEF33A8MVX0 844 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CLOCKO15516 846 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SDC3O75056 442 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 ERN1O75460 977 aaKnown RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CYP7B1O75881 506 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 GPIP06744 558 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 MAOBP27338 520 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 TEAD1P28347 426 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CAPZA2P47755 286 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 ATP4BP51164 291 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 HK3P52790 923 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 RPS13P62277 151 aaKnown RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 EPGNQ6UW88 154 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 OR5AR1Q8NGP9 310 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CCNL2Q96S94 520 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 PRRG3Q9BZD7 231 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SLC6A17Q9H1V8 727 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 PCTPQ9UKL6 214 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 DHRS12A0PJE2 317 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 RPS2P15880 293 aaKnown RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 ETV5P41161 510 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SLC7A2P52569 658 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 FAM174BQ3ZCQ3 159 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SLC9B1Q4ZJI4 515 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 GPAT3Q53EU6 434 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 TNFAIP8L3Q5GJ75 292 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 PIP5KL1Q5T9C9 394 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 RFLNAQ6ZTI6 216 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 TECPR1Q7Z6L1 1165 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 ZC3H7AQ8IWR0 971 aaKnown RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SDR16C5Q8N3Y7 309 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 RNF148Q8N7C7 305 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 PDPRQ8NCN5 879 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 OR2T12Q8NG77 320 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 IL21RQ9HBE5 538 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 THUMPD1Q9NXG2 353 aaKnown RBP8.21□□□□□ -1.1
SYNE1-211ENST00000413186 TAAR2Q9P1P5 351 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 CPNE7Q9UBL6 633 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 COPS7AQ9UBW8 275 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 RAB26Q9ULW5 256 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 SLC9A8Q9Y2E8 581 aa8.21□□□□□ -1.1
SYNE1-211ENST00000413186 A8MU76 341 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CHURC1-FNTBB4DL54 471 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ATP6V1G1O75348 118 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 BCL10O95999 233 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 JMJD7P0C870 316 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ITGA2P17301 1181 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 FNTBP49356 437 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CSNK1EP49674 416 aaKnown RBP8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SEPHS1P49903 392 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 LPAL2Q16609 132 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 FIGLAQ6QHK4 219 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM26Q6ZUK4 368 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 MICU2Q8IYU8 434 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 UBXN10Q96LJ8 280 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 APOL4Q9BPW4 351 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C6orf106Q9H6K1 298 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms