RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 MTX2O75431 263 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PSIP1O75475 530 aaKnown RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 S100BP04271 92 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ESRRAP11474 423 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 EDN3P14138 238 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NQO1P15559 274 aaKnown RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 EPHA3P29320 983 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ACTR1BP42025 376 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KIR3DL1P43629 444 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GPR1P46091 355 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HNMTP50135 292 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ATP4BP51164 291 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MNAT1P51948 309 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CDH13P55290 713 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GFERP55789 205 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 AP1S2P56377 157 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ACTR1AP61163 376 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PDCD2Q16342 344 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 LARP4Q71RC2 724 aaKnown RBP eCLIP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 DET1Q7L5Y6 550 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 VRK3Q8IV63 474 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KLHDC8AQ8IYD2 350 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SLC22A15Q8IZD6 547 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZNF808Q8N4W9 903 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FBXO15Q8NCQ5 510 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 AGR3Q8TD06 166 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ADAMTS17Q8TE56 1095 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SLC37A2Q8TED4 501 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TRPC4APQ8TEL6 797 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NAT14Q8WUY8 206 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ELMO1Q92556 727 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CCDC120Q96HB5 630 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HGH1Q9BTY7 390 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SHCBP1LQ9BZQ2 653 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CD244Q9BZW8 370 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 C1orf21Q9H246 121 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 WDR55Q9H6Y2 383 aaPredicted RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MID1IP1Q9NPA3 183 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FGF21Q9NSA1 209 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TRNAU1APQ9NX07 287 aaKnown RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ARMCX1Q9P291 453 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZNF225Q9UK10 706 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SUFUQ9UMX1 484 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PDE10AQ9Y233 779 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 DNAJC15Q9Y5T4 150 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CAPN7Q9Y6W3 813 aa9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MYO7BQ6PIF6 2116 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GOLGA8QA0A0J9YX86 632 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GOLGA8OA6NCC3 632 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KLHL33A6NCF5 533 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GPR89AB7ZAQ6 455 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 E9PBE3 544 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GOLGA8NF8WBI6 632 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 K7EPI3 171 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PPP6CO00743 305 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 LIN7AO14910 233 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CHUKO15111 745 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KLHL41O60662 606 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RASSF9O75901 435 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CEACAM5P06731 702 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ANXA5P08758 320 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HOXC4P09017 264 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GPR89BP0CG08 455 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PRR35P0CG20 571 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 UROSP10746 265 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TSPAN8P19075 237 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TRIM23P36406 574 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FASLGP48023 281 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PIK3CGP48736 1102 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 MRPL19P49406 292 aaKnown RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PLOD1Q02809 727 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HSPA14Q0VDF9 509 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 FOXD4Q12950 439 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 KLF10Q13118 480 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GTF2H2Q13888 395 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 IL11RAQ14626 422 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NAA25Q14CX7 972 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 HERC3Q15034 1050 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 ZNF648Q5T619 568 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RAET1GQ6H3X3 334 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GTF2H2CQ6P1K8 395 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 PNCKQ6P2M8 343 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 GPRIN3Q6ZVF9 776 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 UBE2R2Q712K3 238 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TWIST2Q8WVJ9 160 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 CMTM5Q96DZ9 223 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 RAB3IPQ96QF0 476 aaPredicted RBP9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 SMR3AQ99954 134 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TMEM79Q9BSE2 394 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 NTMT1Q9BV86 223 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TBC1D10AQ9BXI6 508 aa9.11□□□□□ -0.95
SOX9-AS1-201ENST00000412640 TEX101Q9BY14 249 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms