RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 STX17P56962 302 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 RPS27AP62979 156 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 MC1RQ01726 317 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 NAAAQ02083 359 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 CREB5Q02930 508 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 TGIF1Q15583 401 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 LACTB2Q53H82 288 aaPredicted RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 JAKMIP3Q5VZ66 844 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 OLFML2AQ68BL7 652 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 FAM180BQ6P0A1 224 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 DHRS11Q6UWP2 260 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF600Q6ZNG1 722 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 Q6ZVQ6 151 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 Q71RC1 249 aaPredicted RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 TMUB2Q71RG4 321 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 APCDD1Q8J025 514 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 RASGEF1AQ8N9B8 481 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 C1orf131Q8NDD1 294 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 OR1B1Q8NGR6 318 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 OR6F1Q8NGZ6 308 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 CD99L2Q8TCZ2 262 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 SECISBP2LQ93073 1101 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF622Q969S3 477 aaKnown RBP eCLIP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 TSACCQ96A04 125 aaPredicted RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 CFAP57Q96MR6 1250 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ABHD1Q96SE0 405 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 RBM24Q9BX46 236 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 STRADBQ9C0K7 418 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ASB8Q9H765 288 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 CNOT10Q9H9A5 744 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ISG20L2Q9H9L3 353 aaKnown RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 PLEKHA3Q9HB20 300 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 PSD3Q9NYI0 1048 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 POLKQ9UBT6 870 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL17BQ9UHF5 180 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 FBXL4Q9UKA2 621 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZFP37Q9Y6Q3 630 aaPredicted RBP0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 NPHP3Q7Z494 1330 aa0.88□□□□□ -2.27
RNU2-55P-201ENST00000411146 TRAV24A0A0B4J272 114 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 SPRR5A0A1B0GTR4 108 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZSCAN5CA6NGD5 496 aaPredicted RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 IGLON5A6NGN9 336 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CCT8L1PA6NM43 557 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 E2F3O00716 465 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 RPS6KA5O75582 802 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 LYPD3O95274 346 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 EPCAMP16422 314 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 MDKP21741 143 aaPredicted RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 GIFP27352 417 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 FEN1P39748 380 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CETN2P41208 172 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 RGRP47804 291 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ALDH3A2P51648 485 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 STAT2P52630 851 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 PEX3P56589 373 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 EVCP57679 992 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 LINC00315P59091 139 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 MECOMQ03112 1051 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ABRAXAS2Q15018 415 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 GSG1Q2KHT4 349 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ISXQ2M1V0 245 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 XKR4Q5GH76 650 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CELF3Q5SZQ8 465 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZBTB49Q6ZSB9 765 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 LRRC49Q8IUZ0 686 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CCDC71Q8IV32 467 aaPredicted RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 MINDY1Q8N5J2 469 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 TPRX1Q8N7U7 411 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 BANPQ8N9N5 519 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 LINC01006Q8NI28 216 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CHURC1Q8WUH1 139 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 SNRNP27Q8WVK2 155 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 TEKT4Q8WW24 435 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 FRAT1Q92837 279 aaPredicted RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ST6GALNAC6Q969X2 333 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 MOB3AQ96BX8 217 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 NSUN4Q96CB9 384 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 NTNG2Q96CW9 530 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 HDAC11Q96DB2 347 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 FAM120BQ96EK7 910 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 MUS81Q96NY9 551 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 RCHY1Q96PM5 261 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ALKBH3Q96Q83 286 aaPredicted RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CCT8L2Q96SF2 557 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 SEPHS2Q99611 448 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CTRCQ99895 268 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 EBF4Q9BQW3 602 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CHCHD6Q9BRQ6 235 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 SDCBP2Q9H190 292 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 GHITMQ9H3K2 345 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 ACTL8Q9H568 366 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 C3orf14Q9HBI5 128 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 PDE7BQ9NP56 450 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 RAB9BQ9NP90 201 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 SLC24A2Q9UI40 661 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 CPSF3Q9UKF6 684 aaKnown RBP0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 FBXO7Q9Y3I1 522 aa0.87□□□□□ -2.27
RNU2-55P-201ENST00000411146 FBN1P35555 2871 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 A6NCN8 305 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 FAM231BA6NCW3 169 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms