RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PRUNE1Q86TP1 453 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 CATSPER3Q86XQ3 398 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 AK8Q96MA6 479 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 OR10A4Q9H209 315 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 RPF1Q9H9Y2 349 aaKnown RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 GPR83Q9NYM4 423 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 ANAPC5Q9UJX4 755 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 AGTPBP1Q9UPW5 1226 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 HEG1Q9ULI3 1381 aa3.28□□□□□ -1.89
PMS1-203ENST00000409593 NEDD4P46934 1319 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 SHISA7A6NL88 538 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PRSS46E5RG02 174 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 CCDC188H7C350 402 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 ZNF749O43361 778 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PLOD3O60568 738 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 GALR3O60755 368 aaPredicted RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 PGLSO95336 258 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PDGFRAP16234 1089 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PTAFRP25105 342 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PIK3R1P27986 724 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 CRKLP46109 303 aaKnown RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 C6orf136Q5SQH8 315 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 C5orf24Q7Z6I8 188 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 CCDC185Q8N715 623 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 CCDC89Q8N998 374 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 PSMB7Q99436 277 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 ADNPQ9H2P0 1102 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PFDN4Q9NQP4 134 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 IARS2Q9NSE4 1012 aaKnown RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 TMOD3Q9NYL9 352 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 NFKBIL1Q9UBC1 381 aaPredicted RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 GON4LQ3T8J9 2241 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 TRAV18A0A075B6X5 111 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 TSPY2A6NKD2 308 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 ANXA2P2A6NMY6 339 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 OGTO15294 1046 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 PPIP5K2O43314 1243 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 BCL2L11O43521 198 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 HPP00738 406 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 ZFP36L2P47974 494 aaKnown RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 NPY4RP50391 375 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
PMS1-203ENST00000409593 TNK1Q13470 666 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 SPANXN4Q5MJ08 99 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 BTNL8Q6UX41 500 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 FBXL16Q8N461 479 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 HEXDCQ8WVB3 486 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 RAD54LQ92698 747 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 SIPA1Q96FS4 1042 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 MGME1Q9BQP7 344 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 DPEP2Q9H4A9 486 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 JPT2Q9H910 190 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 NCKAP1Q9Y2A7 1128 aa3.27□□□□□ -1.89
PMS1-203ENST00000409593 FER1L5A0AVI2 2057 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 NKX6-3A6NJ46 265 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 PDHXO00330 501 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 PGRMC2O15173 223 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 SIGLEC5O15389 551 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 MT-ND2P03891 347 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 GOT1P17174 413 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 LBPP18428 481 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 EDNRAP25101 427 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 GCKRQ14397 625 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 C15orf32Q32M92 178 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 FAM46CQ5VWP2 391 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 TRMT11Q7Z4G4 463 aaKnown RBP3.26□□□□□ -1.89
PMS1-203ENST00000409593 SPATA21Q7Z572 469 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 TEX26Q8N6G2 289 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 OR5M9Q8NGP3 310 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 FERMT1Q9BQL6 677 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 NACAP1Q9BZK3 213 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 PRR34Q9NV39 138 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 SATB2Q9UPW6 733 aa3.26□□□□□ -1.89
PMS1-203ENST00000409593 IGLV3-10A0A075B6K4 115 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 FAM86B1E9PN63 330 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 FLRT2O43155 660 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 PHF1O43189 567 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 MELTFP08582 738 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 FAM86B2P0C5J1 330 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 GP9P14770 177 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 CTNNA2P26232 953 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 CDX1P47902 265 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 GMPSP49915 693 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 KHKP50053 298 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 EIPR1Q53HC9 387 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 SEL1L3Q68CR1 1132 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 Q71RC1 249 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 DND1Q8IYX4 353 aaKnown RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 ST6GALNAC6Q969X2 333 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 PAPOLGQ9BWT3 736 aaKnown RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 KCNK13Q9HB14 408 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 DBF4Q9UBU7 674 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 CFDP1Q9UEE9 299 aaPredicted RBP3.25□□□□□ -1.89
PMS1-203ENST00000409593 PILRAQ9UKJ1 303 aa3.25□□□□□ -1.89
PMS1-203ENST00000409593 MRPS18CQ9Y3D5 142 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms