RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ADAM21Q9UKJ8 722 aa15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 DSPP15924 2871 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-208ENST00000409531 TRPC5OSA6NMA1 111 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 TMEM233B4DJY2 109 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 HDAC3O15379 428 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 ZSCAN9O15535 394 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 NDUFS4O43181 175 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 KLK10O43240 276 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 PDYNP01213 254 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 EIF2S1P05198 315 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 SERPIND1P05546 499 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 KITP10721 976 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 FOLR1P15328 257 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 PTX3P26022 381 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 CD82P27701 267 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 SERPINB3P29508 390 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 ITGA1P56199 1179 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 VSX2P58304 361 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 STXBP1P61764 594 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 CYP4F2P78329 520 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 IL11RAQ14626 422 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 GPR19Q15760 415 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 UGT3A2Q3SY77 523 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 SGO1Q5FBB7 561 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 CHSY3Q70JA7 882 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 VN1R4Q7Z5H5 301 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 DDIASQ8IXT1 998 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 CSNK1A1LQ8N752 337 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 NT5CQ8TCD5 201 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 MTFMTQ96DP5 389 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 TM4SF19Q96DZ7 209 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 ZNF285Q96NJ3 590 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 TEFMQ96QE5 360 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 SERPINI1Q99574 410 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 DMRT3Q9NQL9 472 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 ENAMQ9NRM1 1142 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 IRAK4Q9NWZ3 460 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 SIDT1Q9NXL6 827 aaKnown RBP15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 FOXJ2Q9P0K8 574 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 RARRES3Q9UL19 164 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
TSPAN4-208ENST00000409531 LOC105369274A0A096LPK9 316 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 LOC102723532A0A0G2JNH3 316 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 MAGEB17A8MXT2 336 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 SLC28A1O00337 649 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 POLR1CO15160 346 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 SKAP2O75563 359 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 OR2B3O76000 313 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TGDSO95455 350 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TROVE2P10155 538 aaKnown RBP eCLIP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 HTR6P50406 440 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 NEK2P51955 445 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TLE3Q04726 772 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 FOXM1Q08050 763 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 GRM7Q14831 915 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 ABRAXAS2Q15018 415 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 IMPG1Q17R60 797 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TCHHL1Q5QJ38 904 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 WASHC2DQ5SRD0 308 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TLDC1Q6P9B6 456 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TRIM46Q7Z4K8 759 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 OR4N4Q8N0Y3 316 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 TTC29Q8NA56 475 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 SRFBP1Q8NEF9 429 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 CREB3L4Q8TEY5 395 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 ZNF501Q96CX3 271 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 ZNF317Q96PQ6 595 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 OR6C1Q96RD1 312 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 SIKE1Q9BRV8 207 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 ZPBPQ9BS86 351 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 MS4A8Q9BY19 250 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 NSRP1Q9H0G5 558 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 FARSBQ9NSD9 589 aaKnown RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 FGFR1OP2Q9NVK5 253 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 MARCOQ9UEW3 520 aaPredicted RBP15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 LHX6Q9UPM6 363 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 LAMA5O15230 3695 aa15.73■□□□□ 0.11
TSPAN4-208ENST00000409531 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 RGS14O43566 566 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 HCRTR1O43613 425 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 LIPCP11150 499 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 EMP3P54852 163 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 RPS13P62277 151 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 TGM3Q08188 693 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 CLN3Q13286 438 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 CUL3Q13618 768 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 PDCD2Q16342 344 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 NDUFA9Q16795 377 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 COL28A1Q2UY09 1125 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 FAM214AQ32MH5 1076 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 TMEM35AQ53FP2 167 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 GARNL3Q5VVW2 1013 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 BROXQ5VW32 411 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 CEACAM20Q6UY09 585 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 VN1R5Q7Z5H4 357 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 ZFAND4Q86XD8 727 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 PPP1R3BQ86XI6 285 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 DTX1Q86Y01 620 aa15.72■□□□□ 0.11
TSPAN4-208ENST00000409531 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms