RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ATG4AQ8WYN0 398 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 TBC1D20Q96BZ9 403 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 TM4SF19Q96DZ7 209 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 THAP11Q96EK4 314 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 PTCHD1Q96NR3 888 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 MDFIQ99750 246 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 TTYH2Q9BSA4 534 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 RAB6BQ9NRW1 208 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 Q9UFV3 132 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 DNAJC13O75165 2243 aa15.57■□□□□ 0.08
CHMP3-203ENST00000409225 E5RI56 91 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 DNAJB6O75190 326 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 ESR1P03372 595 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 APRTP07741 180 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 GLI4P10075 376 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 JAK1P23458 1154 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 HRH2P25021 359 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 IMPA1P29218 277 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 ADSLP30566 484 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-203ENST00000409225 PPIAP62937 165 aaKnown RBP15.56■□□□□ 0.08
CHMP3-203ENST00000409225 PLGLB1Q02325 96 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 KLF1Q13351 362 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-203ENST00000409225 SPA17Q15506 151 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 CLEC9AQ6UXN8 241 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 B3GNT6Q6ZMB0 384 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 WDR53Q7Z5U6 358 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-203ENST00000409225 CAMKMTQ7Z624 323 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 MBD6Q96DN6 1003 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 C18orf12Q96KH6 178 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 SLC30A3Q99726 388 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 TIMMDC1Q9NPL8 285 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 CCDC177Q9NQR7 707 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-203ENST00000409225 DEPPQ9NTK1 212 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 CRIM1Q9NZV1 1036 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 SH2B3Q9UQQ2 575 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 FAM215AQ9Y5M1 114 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 SLC22A7Q9Y694 548 aa15.56■□□□□ 0.08
CHMP3-203ENST00000409225 TRBV11-1A0A0K0K1C0 115 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 PINLYPA6NC86 204 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 FIGNL2A6NMB9 653 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 SLC16A5O15375 505 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 CHST10O43529 356 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 LCMT2O60294 686 aaKnown RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 VAPBO95292 243 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 B3GALT4O96024 378 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 SLC35G6P0C7Q6 338 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 ARNTP27540 789 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 TBPL1P62380 186 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 BTG2P78543 158 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 HYAL2Q12891 473 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 CUL1Q13616 776 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 HERC3Q15034 1050 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 RNF187Q5TA31 235 aaPredicted RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 CAPN13Q6MZZ7 669 aaPredicted RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 MRNIPQ6NTE8 343 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 CES3Q6UWW8 571 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 PAMR1Q6UXH9 720 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 FBXO15Q8NCQ5 510 aaPredicted RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 NFAM1Q8NET5 270 aaPredicted RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 CREB3L4Q8TEY5 395 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 SMC6Q96SB8 1091 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 REPIN1Q9BWE0 567 aaKnown RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 DMRT3Q9NQL9 472 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 KCMF1Q9P0J7 381 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 FBXW2Q9UKT8 454 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 LIPGQ9Y5X9 500 aa15.55■□□□□ 0.08
CHMP3-203ENST00000409225 NSD1Q96L73 2696 aaPredicted RBP15.55■□□□□ 0.08
CHMP3-203ENST00000409225 A6NNC1 897 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 KIAA1324LA8MWY0 1029 aaPredicted RBP15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ACOT7O00154 380 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 PFDN6O15212 129 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ITGA10O75578 1167 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 TUBB4AP04350 444 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 INHBBP09529 407 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ETS1P14921 441 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 MAOAP21397 527 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 STIP1P31948 543 aaKnown RBP15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ADH7P40394 386 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 DEFB113Q30KQ7 82 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 SLC25A35Q3KQZ1 300 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 DEFB134Q4QY38 66 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 RTL6Q6ICC9 239 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ARMC10Q8N2F6 343 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 PRELID2Q8N945 189 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ZNF740Q8NDX6 193 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ASB11Q8WXH4 323 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 SLCO2A1Q92959 643 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 PACSIN2Q9UNF0 486 aaPredicted RBP15.54■□□□□ 0.08
CHMP3-203ENST00000409225 ERVK-11Q9UQG0 969 aa15.54■□□□□ 0.08
CHMP3-203ENST00000409225 HRNRQ86YZ3 2850 aaPredicted RBP15.54■□□□□ 0.08
CHMP3-203ENST00000409225 BCKDKO14874 412 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 NDUFS4O43181 175 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 ZBTB14O43829 449 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 GALR3O60755 368 aaPredicted RBP15.53■□□□□ 0.08
CHMP3-203ENST00000409225 RAF1P04049 648 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 UQCRC1P31930 480 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 SKIV2L2P42285 1042 aaKnown RBP15.53■□□□□ 0.08
CHMP3-203ENST00000409225 CLCN2P51788 898 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 CLCN7P51798 805 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms