RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 FAM171BQ6P995 826 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ANKLE1Q8NAG6 615 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF548Q8NEK5 533 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 NELL2Q99435 816 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 GSTO2Q9H4Y5 243 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF451Q9Y4E5 1061 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 PCDHB14Q9Y5E9 798 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1W2PRQ8 180 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ITGAMP11215 1152 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 BCKDHAP12694 445 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 PVALBP20472 110 aaPredicted RBP17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF691Q5VV52 312 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 OR6C4Q8NGE1 309 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ZSWIM3Q96MP5 696 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 OR4K3Q96R72 315 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 PIP5K1AQ99755 562 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 ASB4Q9Y574 426 aa17.1■□□□□ 0.33
SMPD4-202ENST00000409031 LRRC14BA6NHZ5 514 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ALX3O95076 343 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ALPLP05186 524 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 SLC3A1Q07837 685 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 TICAM1Q8IUC6 712 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 S100A16Q96FQ6 103 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CCDC120Q96HB5 630 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 OR51E2Q9H255 320 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ZCCHC3Q9NUD5 404 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 GPN3Q9UHW5 284 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 RICTORQ6R327 1708 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 J3KR12 359 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CD2P06729 351 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 RPL35P42766 123 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 TBCEQ15813 527 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 USF2Q15853 346 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 STEAP3Q658P3 488 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 JAZF1Q86VZ6 243 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 RNF130Q86XS8 419 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ATP6V1C2Q8NEY4 427 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 OR2T35Q8NGX2 323 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 PTERQ96BW5 349 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 VMP1Q96GC9 406 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 LGR4Q9BXB1 951 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 MEMO1Q9Y316 297 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 MAGEA12P43365 314 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ARHGDIBP52566 201 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CDK10Q15131 360 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 EXOC3L2Q2M3D2 409 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 REEP3Q6NUK4 255 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 BAIAP2L2Q6UXY1 529 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CHST4Q8NCG5 386 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 GPR152Q8TDT2 470 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 TTPALQ9BTX7 342 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ZNF471Q9BX82 626 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 BHLHE41Q9C0J9 482 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 PCDHGB2Q9Y5G2 931 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 FLRT2O43155 660 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 GABARAPO95166 117 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 RLN2P04090 185 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CBSLP0DN79 551 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CBSP35520 551 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 OR1E2P47887 323 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ARSKQ6UWY0 536 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 PSD4Q8NDX1 1056 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 CRYGNQ8WXF5 182 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 RNF31Q96EP0 1072 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 GORASP2Q9H8Y8 452 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 MGAT4CQ9UBM8 478 aa17.09■□□□□ 0.33
SMPD4-202ENST00000409031 ZFR2Q9UPR6 939 aaKnown RBP17.09■□□□□ 0.33
SMPD4-202ENST00000409031 A0A1W2PQ09 198 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 PROM1O43490 865 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 PRH1P02810 166 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 KLHL24Q6TFL4 600 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 SERPINA13PQ6UXR4 307 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 GALNT13Q8IUC8 556 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.08■□□□□ 0.33
SMPD4-202ENST00000409031 GPR151Q8TDV0 419 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.33
SMPD4-202ENST00000409031 OR10H1Q9Y4A9 318 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.33
SMPD4-202ENST00000409031 SEPT4O43236 478 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 MT-ND5P03915 603 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 BCHEP06276 602 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 TNFSF8P32971 234 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 CLCNKBP51801 687 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 GPR19Q15760 415 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 HLA-DQA1Q5Y7H0 255 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 CEACAM20Q6UY09 585 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 OR5AK3PQ8NH89 298 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 IGSF5Q9NSI5 407 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 SLC22A14Q9Y267 594 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 UGT2A1Q9Y4X1 527 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 FAM170BA6NMN3 283 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 PPEF2O14830 753 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms