RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 NAXDQ8IW45 347 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 GBP7Q8N8V2 638 aaPredicted RBP0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 PROX1Q92786 737 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 MUS81Q96NY9 551 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 CPNE1Q99829 537 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 PAXXQ9BUH6 204 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 SYNCQ9H7C4 482 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 GSN-AS1Q9NRJ2 163 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 DEPPQ9NTK1 212 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 VNN3Q9NY84 501 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 PKD2L2Q9NZM6 624 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 DHRS4-AS1Q9P1J3 65 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 ARMCX1Q9P291 453 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 CRNNQ9UBG3 495 aaPredicted RBP0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 POLKQ9UBT6 870 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 UBQLN2Q9UHD9 624 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF346Q9UL40 294 aaKnown RBP0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 CLEC4EQ9ULY5 219 aa0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 MRPL11Q9Y3B7 192 aaKnown RBP0.74□□□□□ -2.29
MIR548I3-201ENST00000408378 SALL1Q9NSC2 1324 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 FSD2A1L4K1 749 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 BCLAF3A2AJT9 711 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ZSCAN5CA6NGD5 496 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 GLOD5A6NK44 160 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 FOXI3A8MTJ6 420 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 A8MVM7 634 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 C17orf105B2RV13 164 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 NPHP1O15259 732 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 INPP4BO15327 924 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 IPO8O15397 1037 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 TSC22D2O75157 780 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 GJB3O75712 270 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RHBDL1O75783 438 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RECQL5O94762 991 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 OR6B1O95007 311 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 GSRP00390 522 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 PIGRP01833 764 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SERPING1P05155 500 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ATP5BP06576 529 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ASNSP08243 561 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 HMGB1P09429 215 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SAGP10523 405 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ODC1P11926 461 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 F3P13726 295 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 CYP11B2P19099 503 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ACHEP22303 614 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SPRP35270 261 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 MEOX2P50222 304 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 IST1P53990 364 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 WNT4P56705 351 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 CLDN17P56750 224 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ERVPABLB-1P60509 514 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 CREB5Q02930 508 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RALGDSQ12967 914 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 BAATQ14032 418 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 NTRK2Q16620 822 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 PCK2Q16822 640 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 C9orf129Q5T035 196 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 CCDC30Q5VVM6 783 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 FAAH2Q6GMR7 532 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RPAP2Q8IXW5 612 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 TEX26Q8N6G2 289 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF564Q8TBZ8 553 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 PRPF31Q8WWY3 499 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 MCCC1Q96RQ3 725 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 IL12RB2Q99665 862 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 PAPOLGQ9BWT3 736 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 TEX12Q9BXU0 123 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SDCBP2Q9H190 292 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ACTL8Q9H568 366 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 FNDC4Q9H6D8 234 aaPredicted RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RNF121Q9H920 327 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SP140LQ9H930 580 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 WDR41Q9HAD4 459 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 GIMAP4Q9NUV9 329 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 EXOC1Q9NV70 894 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 THYN1Q9P016 225 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 TXNDC16Q9P2K2 825 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 RPS6KB2Q9UBS0 482 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 DDX25Q9UHL0 483 aaKnown RBP0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 SLC24A2Q9UI40 661 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 ITGA11Q9UKX5 1188 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 COLEC10Q9Y6Z7 277 aa0.73□□□□□ -2.29
MIR548I3-201ENST00000408378 IL16Q14005 1332 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TRBV5-4A0A0C4DH59 114 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF487B1APH4 448 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 CLDN4O14493 209 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 AP5Z1O43299 807 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 SRPX2O60687 465 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ENTPD3O75355 529 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 EIF3JO75822 258 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 SAT1P21673 171 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 MDKP21741 143 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 SFTPDP35247 375 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 MDH2P40926 338 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TNFRSF4P43489 277 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 NAP1L1P55209 391 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ADARP55265 1226 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 PSMC6P62333 389 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 CACNG1Q06432 222 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms