RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 FOLR3P41439 243 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 CDH13P55290 713 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 RAB8AP61006 207 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 OCA2Q04671 838 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 SSPNQ14714 243 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 HERC3Q15034 1050 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 TBR1Q16650 682 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 KRT71Q3SY84 523 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 LIPJQ5W064 366 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 MED27Q6P2C8 311 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 SRRM1Q8IYB3 904 aaKnown RBP13.82□□□□□ -0.2
CDPF1-203ENST00000404583 PRSS58Q8IYP2 241 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 AFAP1L2Q8N4X5 818 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 MYRIPQ8NFW9 859 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 OR52B6Q8NGF0 335 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 ATP6V1E2Q96A05 226 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 SPSB2Q99619 263 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 RHBGQ9H310 441 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 WDR54Q9H977 334 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
CDPF1-203ENST00000404583 TRPC4Q9UBN4 977 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 MAP4K5Q9Y4K4 846 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 IGLV3-12A0A075B6K2 115 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 LRIT2A6NDA9 550 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 URADA6NGE7 173 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF860A6NHJ4 632 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 C4orf51C9J302 202 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 G3V2L1 256 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 PPP6CO00743 305 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 PLIN3O60664 434 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 DNAJB6O75190 326 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 RDH16O75452 317 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZGLP1P0C6A0 271 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SMIM10L1P0DMW3 83 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 GSTM2P28161 218 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 OTX2P32243 289 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ARL1P40616 181 aaPredicted RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CCNG1P51959 295 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 HERVK_113P63132 956 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 RHDQ02161 417 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CPSF6Q16630 551 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CCDC153Q494R4 210 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 DEFB134Q4QY38 66 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 UNC50Q53HI1 259 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF678Q5SXM1 525 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 BEND6Q5SZJ8 279 aaPredicted RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ABHD13Q7L211 337 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 LAPTM4BQ86VI4 370 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SLC22A9Q8IVM8 553 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 LAS2Q8IYD9 372 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 OR7G3Q8NG95 312 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 TTC9Q92623 222 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 UBE2E3Q969T4 207 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SMIM10Q96HG1 83 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SEC16BQ96JE7 1060 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 TMEM237Q96Q45 408 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 NTMT1Q9BV86 223 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 PRM3Q9NNZ6 103 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 HCN3Q9P1Z3 774 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 POLHQ9Y253 713 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 PCSK5Q92824 1860 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 A0A0G2JN53 185 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 EIF4E1BA6NMX2 242 aaKnown RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 UGDHO60701 494 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 GALR3O60755 368 aaPredicted RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SPAG7O75391 227 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 SUPT7LO94864 414 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CLDN9O95484 217 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 MYL2P10916 166 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CREB1P16220 341 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 IMPDH1P20839 514 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 PRKAA2P54646 552 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CLCQ05315 142 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 KLC1Q07866 573 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 RBBP7Q16576 425 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 LINC00303Q3SY05 128 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 BORAQ6PGQ7 559 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 RNF175Q8N4F7 328 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 OR51Q1Q8NH59 317 aa13.81□□□□□ -0.2
CDPF1-203ENST00000404583 TRPC4APQ8TEL6 797 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms