RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 A0A087WZ39 114 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 SYCE3A1L190 88 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CACNB4O00305 520 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 PSMD3O43242 534 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 SCO2O43819 266 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ECE2O60344 883 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 MAGEC1O60732 1142 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CYTIPO60759 359 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 GMNNO75496 209 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 BCAS2O75934 225 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 AP2A2O94973 939 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 LETM1O95202 739 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 EML2O95834 649 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CFC1P0CG37 223 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ELAVL4P26378 380 aaKnown RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 OPRL1P41146 370 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR3A2P47893 321 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 NT5C2P49902 561 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 PAX9P55771 341 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 GNB1P62873 340 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 RPP38P78345 283 aaKnown RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 MTF1Q14872 753 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 PKN2Q16513 984 aaKnown RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF876PQ49A33 203 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 PDLIM3Q53GG5 364 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ARHGAP17Q68EM7 881 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 TRMT11Q7Z4G4 463 aaKnown RBP3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CUZD1Q86UP6 607 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 LAX1Q8IWV1 398 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 RAB42Q8N4Z0 105 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CNBD1Q8NA66 436 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR5AP2Q8NGF4 316 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ARHGAP45Q92619 1136 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 GGHQ92820 318 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 BPIFA2Q96DR5 249 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF560Q96MR9 790 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 F2RL3Q96RI0 385 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 NTMT1Q9BV86 223 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 NACAP1Q9BZK3 213 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 C3orf14Q9HBI5 128 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 SCRT2Q9NQ03 307 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 RNF186Q9NXI6 227 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 CYP39A1Q9NYL5 469 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 NDUFA13Q9P0J0 144 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 SATB2Q9UPW6 733 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 NEDD4P46934 1319 aa3.4□□□□□ -1.87
HMGB1P17-201ENST00000403495 A0A087WW49 117 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 TLR4O00206 839 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 CHUKO15111 745 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 GRID2O43424 1007 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 PCDH7O60245 1069 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 STBD1O95210 358 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 PRKAR1AP10644 381 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ODC1P11926 461 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 SNRPD1P62314 119 aaKnown RBP3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC34A1Q06495 639 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ITGA9Q13797 1035 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 FUT11Q495W5 492 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 Q6ZRP5 223 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF410Q86VK4 478 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 MARVELD2Q8N4S9 558 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR4A16Q8NH70 328 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 CD99L2Q8TCZ2 262 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 GPR148Q8TDV2 347 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 DTD2Q96FN9 168 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 MAGED4Q96JG8 741 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 GAL3ST4Q96RP7 486 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 FUCA2Q9BTY2 467 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF696Q9H7X3 374 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZCCHC3Q9NUD5 404 aaKnown RBP3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 MOSPD1Q9UJG1 213 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 FBXL4Q9UKA2 621 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 SH3GLB1Q9Y371 365 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 ETV7Q9Y603 341 aa3.39□□□□□ -1.87
HMGB1P17-201ENST00000403495 DISP3Q9P2K9 1392 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SPATA31D1Q6ZQQ2 1576 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 A0A087X002 238 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PRR23AA6NEV1 266 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC15A5A6NIM6 579 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM72CH0Y354 149 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 M0R296 226 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SIGLEC5O15389 551 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZBTB14O43829 449 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 DUS4LO95620 317 aaKnown RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PAK4O96013 591 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SP1P08047 785 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ABHD2P08910 425 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SKILP12757 684 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 STMN1P16949 149 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC12A3P55017 1021 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 CASP9P55211 416 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC3A1Q07837 685 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 LCP2Q13094 533 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PDE7AQ13946 482 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms