RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CREB1P16220 341 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 ALOX12P18054 663 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 ZNF10P21506 573 aaPredicted RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 IL10P22301 178 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 NAGLUP54802 743 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 TGM3Q08188 693 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 GALNT1Q10472 559 aaPredicted RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 FRMD7Q6ZUT3 714 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 VN1R5Q7Z5H4 357 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 SYVN1Q86TM6 617 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 KCT2Q8NC54 265 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 WDR20Q8TBZ3 569 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 UTP15Q8TED0 518 aaKnown RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 CMTM7Q96FZ5 175 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 SLC29A3Q9BZD2 475 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 TGIF2Q9GZN2 237 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 SLC22A11Q9NSA0 550 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 SLC17A7Q9P2U7 560 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 GPN3Q9UHW5 284 aaPredicted RBP16.78■□□□□ 0.28
CTNS-203ENST00000399306 MAP4K5Q9Y4K4 846 aa16.78■□□□□ 0.28
CTNS-203ENST00000399306 K7ENP7 123 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 BIRC5O15392 142 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 ENO1P06733 434 aaKnown RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 FBLP22087 321 aaKnown RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 CDH13P55290 713 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 RBBP7Q16576 425 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 CFAP157Q5JU67 520 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 ARHGAP40Q5TG30 622 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 C1orf189Q5VU69 101 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 FRG2Q64ET8 278 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 FAM199XQ6PEV8 388 aaPredicted RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 INO80CQ6PI98 192 aaPredicted RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 CCDC81Q6ZN84 652 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 GPRIN3Q6ZVF9 776 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 CHSY3Q70JA7 882 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 MED25Q71SY5 747 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 COX15Q7KZN9 410 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 OR2L5Q8NG80 312 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 OR4F6Q8NGB9 312 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 TRPC4APQ8TEL6 797 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 MS4A6EQ96DS6 147 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 MOCOSQ96EN8 888 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 CNDP1Q96KN2 507 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 FRG2BQ96QU4 278 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 SH3GL2Q99962 352 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 NPLQ9BXD5 320 aaPredicted RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 MS4A8Q9BY19 250 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 ROGDIQ9GZN7 287 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 C12orf65Q9H3J6 166 aaKnown RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 MKKSQ9NPJ1 570 aaPredicted RBP16.77■□□□□ 0.28
CTNS-203ENST00000399306 C14orf105Q9NVL8 296 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 SNX6Q9UNH7 406 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 RNF11Q9Y3C5 154 aa16.77■□□□□ 0.28
CTNS-203ENST00000399306 ZZEF1O43149 2961 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 VSTM2BA6NLU5 285 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 PCDH17O14917 1159 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 EFSO43281 561 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 NPHS1O60500 1241 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 GALR3O60755 368 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 SNUPNO95149 360 aaKnown RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 ESRRBO95718 433 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 TBX6O95947 436 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 SERPIND1P05546 499 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 BPGMP07738 259 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 DHRS4L1P0CG22 281 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 F8A1P23610 371 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 PTX3P26022 381 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 CYP4F2P78329 520 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 CUL3Q13618 768 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 ZRSR2Q15696 482 aaKnown RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 CPSF6Q16630 551 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTNS-203ENST00000399306 DEPDC1Q5TB30 811 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 LCN10Q6JVE6 187 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 TRIM40Q6P9F5 258 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 MYLK4Q86YV6 388 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 OR6Y1Q8NGX8 325 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 COL26A1Q96A83 441 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 MMABQ96EY8 250 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 REXO4Q9GZR2 422 aaKnown RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 BRF2Q9HAW0 419 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 DMRT3Q9NQL9 472 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 ZNF282Q9UDV7 671 aaPredicted RBP16.76■□□□□ 0.27
CTNS-203ENST00000399306 ZNF225Q9UK10 706 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 TCFL5Q9UL49 500 aa16.76■□□□□ 0.27
CTNS-203ENST00000399306 SCN3AQ9NY46 2000 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 A0A0A6YYC8 382 aaPredicted RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 SERTM1A2A2V5 107 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 I3L1I5 382 aaPredicted RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 CREG1O75629 220 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 KLF7O75840 302 aaPredicted RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 KLHL18O94889 574 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 SCELO95171 688 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 HSD3B1P14060 373 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms