RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 EGFLAMQ63HQ2 1017 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 IL4I1Q96RQ9 567 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 TTYH2Q9BSA4 534 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 PDE7BQ9NP56 450 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 PDCD5O14737 125 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 C5AR1P21730 350 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 TDRPQ86YL5 185 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 GATSQ8NAP1 163 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 THEM6Q8WUY1 208 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 RETREG1Q9H6L5 497 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 DUX1O43812 170 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 AKAP8O43823 692 aaKnown RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 RAP2AP10114 183 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 FBLP22087 321 aaKnown RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 CST6Q15828 149 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ZFP69Q49AA0 526 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 OR52E4Q8NGH9 312 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SP140LQ9H930 580 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 CLIC1O00299 241 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 AKR1D1P51857 326 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF267Q14586 743 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 KLHL22Q53GT1 634 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 LYSMD4Q5XG99 296 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 OR2L8Q8NGY9 312 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 WDR92Q96MX6 357 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 SPIN1Q9Y657 262 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 C5orf51A6NDU8 294 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 LOC730098B7Z3J9 87 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PRAMEF11O60813 436 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PRPS1L1P21108 318 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PROZP22891 400 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 ETV3P41162 512 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PXNP49023 591 aaPredicted RBP13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PTPRCAPQ14761 206 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 YIPF7Q8N8F6 280 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PNPLA2Q96AD5 504 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 FAM129BQ96TA1 746 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 OR51B5Q9H339 312 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 TRNAU1APQ9NX07 287 aaKnown RBP13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 UPB1Q9UBR1 384 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 APOBEC3BQ9UH17 382 aaKnown RBP13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 PFDN2Q9UHV9 154 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF639Q9UID6 485 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 SCML1Q9UN30 329 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 TTC34A8MYJ7 566 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 C2orf74A8MZ97 194 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF878C9JN71 531 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 CDH1P12830 882 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 ARSAP15289 507 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 TDGQ13569 410 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 SPIN4Q56A73 249 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 FRG2Q64ET8 278 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 TTLL10Q6ZVT0 673 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM203Q969S6 136 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 FRG2BQ96QU4 278 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 GALPQ9UBC7 116 aa13.77□□□□□ -0.2
PCDHA11-201ENST00000398640 HIDE1A8MVS5 230 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 RPS13P62277 151 aaKnown RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 IQCCQ4KMZ1 466 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF101Q8IZC7 436 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 OR5K1Q8NHB7 308 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 MNTQ99583 582 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 PTGES2Q9H7Z7 377 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 BRF2Q9HAW0 419 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 B4GALT6Q9UBX8 382 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF221Q9UK13 617 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 PCDHGB7Q9Y5F8 929 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 A0A1W2PQU0 124 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 GP1BBP13224 206 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 ERVFC1P60507 584 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 ELAVL3Q14576 367 aaKnown RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 KHDC1Q4VXA5 237 aaKnown RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 SPIN3Q5JUX0 258 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 NPY6RQ99463 290 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 EFCAB11Q9BUY7 163 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 FABP12A6NFH5 140 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 CLPXO76031 633 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 SCGB1D2O95969 90 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 NR0B1P51843 470 aaKnown RBP13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 OR2M4Q96R27 311 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 CADM1Q9BY67 442 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms