RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CGB2Q6NT52 195 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF433Q8N7K0 673 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR13J1Q8NGT2 312 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ISG20Q96AZ6 181 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MVB12BQ9H7P6 319 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZDHHC7Q9NXF8 308 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 H3BSA7 217 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MASP1P48740 699 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 CLCN7P51798 805 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 WDR5P61964 334 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ABATP80404 500 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 BICRALQ6AI39 1079 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 METTL2BQ6P1Q9 378 aaKnown RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 GALNT7Q86SF2 657 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MDGA1Q8NFP4 955 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 SHDQ96IW2 340 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 WDR92Q96MX6 357 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 LINC00597Q9H2U6 94 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 TMEM9Q9P0T7 183 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 TFECO14948 347 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MAGP20916 626 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MATN1P21941 496 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MXD1Q05195 221 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 MANEALQ5VSG8 457 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC30A6Q6NXT4 461 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC9B2Q86UD5 537 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 LRRC17Q8N6Y2 441 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 NR4A3Q92570 626 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 DGAT2Q96PD7 388 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 TBC1D17Q9HA65 648 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 TMEM45AQ9NWC5 275 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 CKLFQ9UBR5 152 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 CFL2Q9Y281 166 aa13.72□□□□□ -0.21
PCDHGA11-201ENST00000398587 H0YJX3 145 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ADAM12O43184 909 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 OR4D2P58180 307 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 DEFB103AP81534 67 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SCN1BQ07699 218 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCNAB2Q13303 367 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL18Q14116 193 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF773Q6PK81 442 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 FRRS1Q6ZNA5 592 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ATG14Q6ZNE5 492 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 HTRA1Q92743 480 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 RAB8BQ92930 207 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 FBXL8Q96CD0 374 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 KLHDC7BQ96G42 594 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 COQ7Q99807 217 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCNK13Q9HB14 408 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 GPRC5BQ9NZH0 403 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 DAPL1A0PJW8 107 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 IGLON5A6NGN9 336 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 DHFRP00374 187 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL3P08700 152 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 RPS17P08708 135 aaKnown RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 C8orf89P0DMQ9 161 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ATF6P18850 670 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 INHBCP55103 352 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 RHAGQ02094 409 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SMU1Q2TAY7 513 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 LCN8Q6JVE9 175 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 MOAP1Q96BY2 351 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 C11orf24Q96F05 449 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 IL17FQ96PD4 163 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 EXO5Q9H790 373 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 Q9N2J8 555 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SDK1Q7Z5N4 2213 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ABCB7O75027 752 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SNX4O95219 450 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ASGR2P07307 311 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 GIMD1P0DJR0 217 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ZNF12P17014 697 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 CD9P21926 228 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 SLC7A9P82251 487 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 MEP1AQ16819 746 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 PRRT3Q5FWE3 981 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 NXPE4Q6UWF7 544 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 PEG10Q86TG7 708 aaKnown RBP13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 ARMC5Q96C12 935 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 MS4A12Q9NXJ0 267 aa13.71□□□□□ -0.21
PCDHGA11-201ENST00000398587 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms