RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 PDSS2Q86YH6 399 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 AFAP1L2Q8N4X5 818 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 IL22RA1Q8N6P7 574 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 KDF1Q8NAX2 398 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 UTP15Q8TED0 518 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 MS4A6EQ96DS6 147 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 MVB12AQ96EY5 273 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 FRG2BQ96QU4 278 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 KCNA7Q96RP8 456 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 TRMOQ9BU70 441 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 MS4A8Q9BY19 250 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 SHCBP1LQ9BZQ2 653 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 TNFRSF12AQ9NP84 129 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 DMRT3Q9NQL9 472 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 SLC22A11Q9NSA0 550 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 ADGRE2Q9UHX3 823 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 MAU2Q9Y6X3 613 aa16.49■□□□□ 0.23
CSNK1D-204ENST00000398519 LOC101059948A0A1B0GTJ6 334 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 TERTO14746 1132 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 ENO1P06733 434 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 CHRNGP07510 517 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 ZNF888P0CJ79 500 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 AGXTP21549 392 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 OR1D4P47884 311 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 FOXA1P55317 472 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 STXBP1P61764 594 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 RCN2Q14257 317 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 SLC9A5Q14940 896 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 CHI3L2Q15782 390 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 NKAIN1Q4KMZ8 207 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 TCHHL1Q5QJ38 904 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 TTC19Q6DKK2 380 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 PRMT9Q6P2P2 845 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 FAM198BQ6UWH4 519 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 ATG14Q6ZNE5 492 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 OR9A4Q8NGU2 314 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 CT55Q8WUE5 264 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 SLC29A3Q9BZD2 475 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 REXO4Q9GZR2 422 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 ELOVL6Q9H5J4 265 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 FARSBQ9NSD9 589 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 CROTQ9UKG9 612 aa16.48■□□□□ 0.23
CSNK1D-204ENST00000398519 URADA6NGE7 173 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 MAGEB17A8MXT2 336 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 NSA2O95478 260 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ONECUT2O95948 504 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 B3GALT4O96024 378 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 TGFB1P01137 390 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SMIM10L1P0DMW3 83 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ALOX12P18054 663 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 RAB8AP61006 207 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 RPS13P62277 151 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 IFT88Q13099 833 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SRSF6Q13247 344 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 HERC3Q15034 1050 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ARL13AQ5H913 290 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 COX15Q7KZN9 410 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ABHD13Q7L211 337 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 CUZD1Q86UP6 607 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 VASH2Q86V25 355 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 PPP1R14CQ8TAE6 165 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 METTL6Q8TCB7 284 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 GAL3ST3Q96A11 431 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 MTFMTQ96DP5 389 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 MMABQ96EY8 250 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 CMTM7Q96FZ5 175 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SMIM10Q96HG1 83 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 DCBLD2Q96PD2 775 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 F2RL3Q96RI0 385 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 DPH1Q9BZG8 443 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ANKHQ9HCJ1 492 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ZNF304Q9HCX3 659 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 WDR70Q9NW82 654 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SNX6Q9UNH7 406 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 NAALAD2Q9Y3Q0 740 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 TIMM22Q9Y584 194 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 H3BQF6 201 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 FOXE1O00358 373 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 DYNC1I1O14576 645 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 KLK10O43240 276 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ERI3O43414 337 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ATP8B1O43520 1251 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 KLHL18O94889 574 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 ETHE1O95571 254 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 PDYNP01213 254 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SERPINE1P05121 402 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 TCN2P20062 427 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 BGNP21810 368 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 F8A1P23610 371 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SERPINB5P36952 375 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 DLSTP36957 453 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 PHEXP78562 749 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 GALNT1Q10472 559 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 DEFB134Q4QY38 66 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 SGO1Q5FBB7 561 aa16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 C10orf62Q5T681 223 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-204ENST00000398519 AMER3Q8N944 861 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms