RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 FAM208BQ5VWN6 2430 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 URADA6NGE7 173 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 ZNF860A6NHJ4 632 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 OR7A17O14581 309 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 PLIN3O60664 434 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 UGDHO60701 494 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 RDH16O75452 317 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 B3GALT4O96024 378 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 UMODP07911 640 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 OTX2P32243 289 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 CCNG1P51959 295 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 RAB8AP61006 207 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 STXBP1P61764 594 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 HERVK_113P63132 956 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 DEFB134Q4QY38 66 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 LIPJQ5W064 366 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 SLC22A9Q8IVM8 553 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 LAS2Q8IYD9 372 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 PRSS58Q8IYP2 241 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 IQCKQ8N0W5 287 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 CCDC63Q8NA47 563 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 STT3BQ8TCJ2 826 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 ADAMTS17Q8TE56 1095 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 UTP15Q8TED0 518 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 ZNF483Q8TF39 744 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 MIEF2Q96C03 454 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 CDK15Q96Q40 435 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 ERVK-6Q9BXR3 956 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 AICDAQ9GZX7 198 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 RHBGQ9H310 441 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 ACSS2Q9NR19 701 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 HCN3Q9P1Z3 774 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 POLHQ9Y253 713 aa20.09■□□□□ 0.81
TSPAN4-206ENST00000397408 IGLV3-12A0A075B6K2 115 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 VSTM2BA6NLU5 285 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 C4orf51C9J302 202 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 GALR3O60755 368 aaPredicted RBP20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 ITGB2P05107 769 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 ZGLP1P0C6A0 271 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 MYL2P10916 166 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 HNRNPH1P31943 449 aaKnown RBP20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 PRKAA2P54646 552 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 CDH13P55290 713 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 TBR1Q16650 682 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 VWA2Q5GFL6 755 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 ZNF678Q5SXM1 525 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 CEP85LQ5SZL2 805 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 ZYG11AQ6WRX3 759 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 RAB43Q86YS6 212 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 OR7G3Q8NG95 312 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 PPP4R1Q8TF05 950 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 TTC9Q92623 222 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 EXTL1Q92935 676 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 ZBTB9Q96C00 473 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 IQCGQ9H095 443 aaKnown RBP20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 MKKSQ9NPJ1 570 aaPredicted RBP20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 RNF11Q9Y3C5 154 aa20.08■□□□□ 0.8
TSPAN4-206ENST00000397408 CHD6Q8TD26 2715 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 G3V2L1 256 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 RGS16O15492 202 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 SUPT7LO94864 414 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 CLDN9O95484 217 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 TBX6O95947 436 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 TSPAN8P19075 237 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 SKP1P63208 163 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 KLC1Q07866 573 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 TRAF3Q13114 568 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 DDX39BQ13838 428 aaKnown RBP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 SSPNQ14714 243 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 RBBP7Q16576 425 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 CPSF6Q16630 551 aaKnown RBP eCLIP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 UNC50Q53HI1 259 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 BEND6Q5SZJ8 279 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 BORAQ6PGQ7 559 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 BANPQ8N9N5 519 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 L3MBTL4Q8NA19 623 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 ZNF473Q8WTR7 871 aaKnown RBP20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 THAP4Q8WY91 577 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 GAL3ST3Q96A11 431 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 SMC6Q96SB8 1091 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 CRB3Q9BUF7 120 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 C14orf105Q9NVL8 296 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 MAN2B2Q9Y2E5 1009 aa20.07■□□□□ 0.8
TSPAN4-206ENST00000397408 LRIT2A6NDA9 550 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 ERI3O43414 337 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 SPAG7O75391 227 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 SMIM10L1P0DMW3 83 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 SERPINB1P30740 379 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 HPDP32754 393 aaPredicted RBP20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 NIPAL1Q6NVV3 410 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 MRGPREQ86SM8 312 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 ZC3H7AQ8IWR0 971 aaKnown RBP20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 SHISA5Q8N114 240 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 OR5T3Q8NGG3 340 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 RDH11Q8TC12 318 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 TRPC4APQ8TEL6 797 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 MS4A6EQ96DS6 147 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 CCDC126Q96EE4 140 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 L3HYPDHQ96EM0 354 aa20.06■□□□□ 0.8
TSPAN4-206ENST00000397408 SMIM10Q96HG1 83 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms