RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 HMGCS1Q01581 520 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 BTKQ06187 659 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 NDUFA9Q16795 377 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 TMEM35AQ53FP2 167 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 TMEM214Q6NUQ4 689 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 WDR75Q8IWA0 830 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 LRRC34Q8IZ02 419 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 MS4A6EQ96DS6 147 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 RNF31Q96EP0 1072 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 PPP1R36Q96LQ0 422 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 CENPKQ9BS16 269 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 NDC1Q9BTX1 674 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 SLC7A5P2Q9GIP4 190 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 POLR1BQ9H9Y6 1135 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 PFDN4Q9NQP4 134 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 FGFR1OP2Q9NVK5 253 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 NMRK1Q9NWW6 199 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 MRPS2Q9Y399 296 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 KNTC1P50748 2209 aa22.46■■□□□ 1.19
TSPAN4-203ENST00000397397 HDAC3O15379 428 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 RGS14O43566 566 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 TIAF1O95411 115 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 JUNP05412 331 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ZNF888P0CJ79 500 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 LSP1P33241 339 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 EMP3P54852 163 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 GABREP78334 506 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 CUL3Q13618 768 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 FAM214AQ32MH5 1076 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ADPRMQ3LIE5 342 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 YOD1Q5VVQ6 348 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 GARNL3Q5VVW2 1013 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ABHD13Q7L211 337 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 UTP15Q8TED0 518 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 GAL3ST3Q96A11 431 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 C19orf60Q96EN9 201 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 C10orf90Q96M02 699 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ZNF317Q96PQ6 595 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 CCT7Q99832 543 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 DDA1Q9BW61 102 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 NUF2Q9BZD4 464 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ACTR5Q9H9F9 607 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 CUTCQ9NTM9 273 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 VPS29Q9UBQ0 182 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 PCDHGA8Q9Y5G5 932 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 B3GALT1Q9Y5Z6 326 aa22.45■■□□□ 1.18
TSPAN4-203ENST00000397397 ERI3O43414 337 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 TNFSF15O95150 251 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 RAP1GDS1P52306 607 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 PLA2G16P53816 162 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 ARSFP54793 590 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 RAB8AP61006 207 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 TGM3Q08188 693 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 MUM1Q2TAK8 710 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 TMEM164Q5U3C3 297 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 TRIM40Q6P9F5 258 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 ARHGEF39Q8N4T4 335 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 OR2L5Q8NG80 312 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 RGMAQ96B86 450 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 TEFMQ96QE5 360 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 ZPBPQ9BS86 351 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 ASPSCR1Q9BZE9 553 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 ANGPTL2Q9UKU9 493 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 SRPK3Q9UPE1 567 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 USH1CQ9Y6N9 552 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 SPEGQ15772 3267 aa22.44■■□□□ 1.18
TSPAN4-203ENST00000397397 A0A0G2JN53 185 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 TRPC5OSA6NMA1 111 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 C4orf51C9J302 202 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 MED26O95402 600 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 GCGRP47871 477 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 SNRPNP63162 240 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 SHC2P98077 582 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 SPDYAQ5MJ70 313 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 TTLL10Q6ZVT0 673 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 SRFBP1Q8NEF9 429 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 OR2T11Q8NH01 316 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 CHMP6Q96FZ7 201 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 C3orf30Q96M34 536 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 TXLNGQ9NUQ3 528 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 NDOR1Q9UHB4 597 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 KLK13Q9UKR3 277 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 PCDHB3Q9Y5E6 796 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 SLC22A7Q9Y694 548 aa22.43■■□□□ 1.18
TSPAN4-203ENST00000397397 C9orf172C9J069 976 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 SEMA3DO95025 777 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 NTRK1P04629 796 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 HBQ1P09105 142 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 SMIM10L1P0DMW3 83 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 ALOX12P18054 663 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 ALAS2P22557 587 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 HERC3Q15034 1050 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 NR6A1Q15406 480 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 XKR7Q5GH72 579 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 ABHD17CQ6PCB6 329 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 Q6ZSR9 355 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 UBE3DQ7Z6J8 389 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 CLIP3Q96DZ5 547 aa22.42■■□□□ 1.18
TSPAN4-203ENST00000397397 THOC1Q96FV9 657 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms