RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ANKS4BQ8N8V4 417 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 AMER3Q8N944 861 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 KIAA1191Q96A73 305 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 SMAD5Q99717 465 aaKnown RBP13.81□□□□□ -0.2
SEC13-208ENST00000397109 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 C3orf18Q9UK00 162 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 FBXL4Q9UKA2 621 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 SLC22A7Q9Y694 548 aa13.81□□□□□ -0.2
SEC13-208ENST00000397109 TNRC6AQ8NDV7 1962 aaKnown RBP13.81□□□□□ -0.2
SEC13-208ENST00000397109 A0A1W2PPM1 405 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 DPM1O60762 260 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 H2AFYO75367 372 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 PDGFAP04085 211 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ALPPP05187 535 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 GNAZP19086 355 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 DRD4P21917 467 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 CXCR2P25025 360 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TYK2P29597 1187 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 AHRP35869 848 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 CCT5P48643 541 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 HNRNPH2P55795 449 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 SKP1P63208 163 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 RGS1Q08116 209 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 PDK4Q16654 411 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 CATSPEREQ5SY80 951 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 SULT1C3Q6IMI6 304 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 NIPAL1Q6NVV3 410 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 NXPE4Q6UWF7 544 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 KIRREL2Q6UWL6 708 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 PIGWQ7Z7B1 504 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 TMEM151BQ8IW70 566 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 PRSS58Q8IYP2 241 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TSNARE1Q96NA8 513 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 NMRAL1Q9HBL8 299 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 CNTRLQ7Z7A1 2325 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 NBASA2RRP1 2371 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 SCN3AQ9NY46 2000 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 A0A087X1B8 175 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 IDSB3KWA1 339 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 WDR47O94967 919 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 STATHP02808 62 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 C2P06681 752 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 HEXBP07686 556 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 CYC1P08574 325 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ACPPP15309 386 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 GGT5P36269 586 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 SCTRP47872 440 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 SLC6A12P48065 614 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 REEP5Q00765 189 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TLE1Q04724 770 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 HERC3Q15034 1050 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 IRAK1BP1Q5VVH5 260 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ATG9BQ674R7 924 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TMPRSS11BQ86T26 416 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 C4orf33Q8N1A6 199 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 SPATA6LQ8N4H0 392 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ANKRD42Q8N9B4 389 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 KCT2Q8NC54 265 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 TRPV3Q8NET8 790 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 OR11G2Q8NGC1 345 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 OR9A4Q8NGU2 314 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 UNKQ9C0B0 810 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 GPRC5BQ9NZH0 403 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 RNF112Q9ULX5 631 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 MRPS2Q9Y399 296 aaKnown RBP13.8□□□□□ -0.2
SEC13-208ENST00000397109 NUP210LQ5VU65 1888 aa13.8□□□□□ -0.2
SEC13-208ENST00000397109 DOCK10Q96BY6 2186 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 PCSK5Q92824 1860 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 A0A096LPK6 155 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 CCDC189A1A4V9 331 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 URADA6NGE7 173 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 NDUFS4O43181 175 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 WISP1O95388 367 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 HPP00738 406 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 S100BP04271 92 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 VIMP08670 466 aaKnown RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 LTA4HP09960 611 aaKnown RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 C1GALT1C1LP0DN25 315 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 COL6A2P12110 1019 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 IL1RNP18510 177 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 MEF2AQ02078 507 aaPredicted RBP13.79□□□□□ -0.2
SEC13-208ENST00000397109 CDC16Q13042 620 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 LCA5Q86VQ0 697 aa13.79□□□□□ -0.2
SEC13-208ENST00000397109 ZC3H7AQ8IWR0 971 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms