RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 GEMIN6Q8WXD5 167 aaKnown RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 BORCS5Q969J3 196 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ROPN1LQ96C74 230 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ZC3H10Q96K80 434 aaKnown RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 TRIM36Q9NQ86 728 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ZNF224Q9NZL3 707 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ZNF221Q9UK13 617 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ITGB1BP2Q9UKP3 347 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 PDE10AQ9Y233 779 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 KCNIP3Q9Y2W7 256 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ADAMTS13Q76LX8 1427 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 A0A1W2PQU0 124 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SHOX2O60902 331 aaPredicted RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 APBB3O95704 486 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CSTAP01040 98 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 FCER2P06734 321 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ASGR2P07307 311 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CCND3P30281 292 aaPredicted RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 OXTRP30559 389 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 POU6F2P78424 691 aaPredicted RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 SRYQ05066 204 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SLC3A1Q07837 685 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 DHCR24Q15392 516 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 TPRG1LQ5T0D9 272 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 VWA5B1Q5TIE3 1220 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 REP15Q6BDI9 236 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CLEC20AQ6ZU45 233 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ZNF550Q7Z398 422 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 RABEPKQ7Z6M1 372 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 TRIM74Q86UV6 250 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 C7orf57Q8NEG2 295 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CPT1CQ8TCG5 803 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SPRYD4Q8WW59 207 aaPredicted RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 RAB7BQ96AH8 199 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 AP1S3Q96PC3 154 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 DNTTIP1Q9H147 329 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 C1orf21Q9H246 121 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 IKZF4Q9H2S9 585 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CREBZFQ9NS37 354 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 FZD10Q9ULW2 581 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 NOP16Q9Y3C1 178 aaKnown RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 GLI2P10070 1586 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SHROOM2Q13796 1616 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ANKRD66B4E2M5 251 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SPARCP09486 303 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CASP7P55210 303 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SLC26A5P58743 744 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 PTCHD3Q3KNS1 767 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 FLYWCH1Q4VC44 716 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 GPRC6AQ5T6X5 926 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 HMBOX1Q6NT76 420 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 SUSD1Q6UWL2 747 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 CLIP4Q8N3C7 705 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 OR9A1PQ8NGU1 263 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 OR8K5Q8NH50 307 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 C22orf15Q8WYQ4 148 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 TFAP2BQ92481 460 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 NTAN1Q96AB6 310 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 LRRC58Q96CX6 371 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 PELOQ9BRX2 385 aaKnown RBP6.97□□□□□ -1.29
UPF2-203ENST00000397053 TSSK6Q9BXA6 273 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 FZD8Q9H461 694 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 KCNIP1Q9NZI2 227 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 DTLQ9NZJ0 730 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 ADGBQ8N7X0 1667 aa6.97□□□□□ -1.29
UPF2-203ENST00000397053 RNF17Q9BXT8 1623 aaKnown RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 GLOD5A6NK44 160 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 E7ENX8 843 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 H7BY64 318 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 ZNF217O75362 1048 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 ECI2O75521 394 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 PLATP00750 562 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 RPLP0P05388 317 aaKnown RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 CD48P09326 243 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 H2BFMP0C1H6 154 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 MAPK3P27361 379 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 POU3F4P49335 361 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 MAN2A2P49641 1150 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 MLLT6P55198 1093 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 BLMHQ13867 455 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 SLC5A9Q2M3M2 681 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 SOWAHAQ2M3V2 549 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 OR4F3Q6IEY1 312 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 CRTC1Q6UUV9 634 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 TIGD4Q8IY51 512 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 PPP1R35Q8TAP8 253 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 SCGB1C1Q8TD33 95 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 BADQ92934 168 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 PRAP1Q96NZ9 151 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 ERMAPQ96PL5 475 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 CDK15Q96Q40 435 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 XKR8Q9H6D3 395 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 C8orf33Q9H7E9 229 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 ZBTB20Q9HC78 741 aaPredicted RBP6.96□□□□□ -1.29
UPF2-203ENST00000397053 FZD3Q9NPG1 666 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 MTMR10Q9NXD2 777 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 IGSF9Q9P2J2 1179 aa6.96□□□□□ -1.29
UPF2-203ENST00000397053 GNG8Q9UK08 70 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms