RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 DPEP2Q9H4A9 486 aa3.4□□□□□ -1.87
CMC1-202ENST00000396610 RPF1Q9H9Y2 349 aaKnown RBP3.4□□□□□ -1.87
CMC1-202ENST00000396610 THAP10Q9P2Z0 257 aaPredicted RBP3.4□□□□□ -1.87
CMC1-202ENST00000396610 SATB2Q9UPW6 733 aa3.4□□□□□ -1.87
CMC1-202ENST00000396610 ZNF510Q9Y2H8 683 aa3.4□□□□□ -1.87
CMC1-202ENST00000396610 HBS1LQ9Y450 684 aaKnown RBP3.4□□□□□ -1.87
CMC1-202ENST00000396610 PCNX3Q9H6A9 2034 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 IGHV4-30-2A0A087WSY4 118 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 SIGLEC5O15389 551 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 MLNRO43193 412 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 RLN1P04808 185 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 SCG2P13521 617 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 ACADSP16219 412 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 GOT1P17174 413 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 CAPN2P17655 700 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 ZNF10P21506 573 aaPredicted RBP3.39□□□□□ -1.87
CMC1-202ENST00000396610 EDNRAP25101 427 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 HOXC13P31276 330 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 GPR183P32249 361 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 SCN1BQ07699 218 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 PTK6Q13882 451 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 TCTEX1D4Q5JR98 221 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 SPANXN4Q5MJ08 99 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 C3P1Q6ZMU1 363 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 TRMT11Q7Z4G4 463 aaKnown RBP3.39□□□□□ -1.87
CMC1-202ENST00000396610 PHLDB2Q86SQ0 1253 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 GLRX5Q86SX6 157 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 FAM131BQ86XD5 332 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 MEX3DQ86XN8 651 aaKnown RBP3.39□□□□□ -1.87
CMC1-202ENST00000396610 TDHQ8IZJ6 230 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 TEX26Q8N6G2 289 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 OR52B6Q8NGF0 335 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 OR10G7Q8NGN6 311 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 DEPDC1BQ8WUY9 529 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 DNASE1L2Q92874 299 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 FAM162AQ96A26 154 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 LURAP1Q96LR2 239 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 TSSK2Q96PF2 358 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 IL12RB2Q99665 862 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 SOSTQ9BQB4 213 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 UBQLN3Q9H347 655 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 C10orf88Q9H8K7 445 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 C3orf14Q9HBI5 128 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 TMOD3Q9NYL9 352 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 NCKAP1Q9Y2A7 1128 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
CMC1-202ENST00000396610 IGHV3-38A0A0C4DH36 116 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 A0A1W2PPR1 153 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 SHISA7A6NL88 538 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 YDJCA8MPS7 323 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 SHC1P29353 583 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 OXTRP30559 389 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 KCNJ1P48048 391 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 CLCN4P51793 760 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 NDST2P52849 883 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 IRX6P78412 446 aaPredicted RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 RBP5P82980 135 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 GRB14Q14449 540 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 LRRC37A5PQ49AS3 106 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 FAM133BQ5BKY9 247 aaKnown RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 ZRANB3Q5FWF4 1079 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 SPOUT1Q5T280 376 aaKnown RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 MACC1Q6ZN28 852 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 GALNTL5Q7Z4T8 443 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 LMNTD2Q8IXW0 634 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 SIX6OS1Q8N1H7 587 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 SMYD1Q8NB12 490 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 UXS1Q8NBZ7 420 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 CITED2Q99967 270 aaPredicted RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 THUMPD3Q9BV44 507 aaKnown RBP3.38□□□□□ -1.87
CMC1-202ENST00000396610 GMEB2Q9UKD1 530 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 ITGA11Q9UKX5 1188 aa3.38□□□□□ -1.87
CMC1-202ENST00000396610 A0A0B4J203 849 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 NKX6-3A6NJ46 265 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 A8MXK9 166 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 CTDSPLO15194 276 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 WDR46O15213 610 aaKnown RBP3.37□□□□□ -1.87
CMC1-202ENST00000396610 ACSL4O60488 711 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 HPRP00739 348 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 SUPT20HL2P0C7V6 817 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 GATA2P23769 480 aaPredicted RBP3.37□□□□□ -1.87
CMC1-202ENST00000396610 GIFP27352 417 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 PIK3R1P27986 724 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 SRD5A2P31213 254 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 ETV5P41161 510 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 OR3A3P47888 321 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 SLC8A3P57103 927 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 CD300CQ08708 224 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 COX10Q12887 443 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 PPA1Q15181 289 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 TWISTNBQ3B726 338 aaPredicted RBP3.37□□□□□ -1.87
CMC1-202ENST00000396610 MS4A18Q3C1V0 323 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.37□□□□□ -1.87
CMC1-202ENST00000396610 CASC4Q6P4E1 433 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 C15orf52Q6ZUT6 534 aaKnown RBP3.37□□□□□ -1.87
CMC1-202ENST00000396610 Q6ZVQ6 151 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 SLC47A2Q86VL8 602 aa3.37□□□□□ -1.87
CMC1-202ENST00000396610 KLHL7Q8IXQ5 586 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms