RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 ZNF483Q8TF39 744 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 EXTL1Q92935 676 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 NACC2Q96BF6 587 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 WBP1Q96G27 269 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 NSUN5Q96P11 429 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 UBL7Q96S82 380 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 NTMT1Q9BV86 223 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 ERVK-6Q9BXR3 956 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 KLHL31Q9H511 634 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 NOL11Q9H8H0 719 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 ACTR8Q9H981 624 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 RRAGDQ9NQL2 400 aaPredicted RBP16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 TRPC4Q9UBN4 977 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 GRID1Q9ULK0 1009 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 TSC22D4Q9Y3Q8 395 aa16.85■□□□□ 0.29
TNFSF13-204ENST00000396542 LRIT2A6NDA9 550 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 URADA6NGE7 173 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 ANKDD1BA6NHY2 528 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 C4orf51C9J302 202 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 G3V2L1 256 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 SGK494L7N484 410 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 COPEO14579 308 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 PLIN3O60664 434 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 KLHL18O94889 574 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 ZNF888P0CJ79 500 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 SERPINB1P30740 379 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 HNRNPH1P31943 449 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 STXBP1P61764 594 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 MAT1AQ00266 395 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 OCA2Q04671 838 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 SYT16Q17RD7 645 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 DEFB109BQ30KR1 87 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 CCDC153Q494R4 210 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 VWA2Q5GFL6 755 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 TOR1AIP1Q5JTV8 583 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 RAB43Q86YS6 212 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 OR7G3Q8NG95 312 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 OR52B6Q8NGF0 335 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 ZNF473Q8WTR7 871 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 MIEF2Q96C03 454 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 MS4A6EQ96DS6 147 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 C14orf105Q9NVL8 296 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 KCNMB2Q9Y691 235 aa16.84■□□□□ 0.29
TNFSF13-204ENST00000396542 H0YIV9 168 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 FFAR3O14843 346 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 GPR42O15529 346 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 RDH16O75452 317 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 ERLIN1O75477 346 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 CLDN9O95484 217 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 IMPDH1P20839 514 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 HPDP32754 393 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 PRKAA2P54646 552 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 KLC1Q07866 573 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 TRAF3Q13114 568 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 DEFB134Q4QY38 66 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 ZNF678Q5SXM1 525 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 ZYG11AQ6WRX3 759 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 PPP1R32Q7Z5V6 425 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 MRGPREQ86SM8 312 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 SLC22A9Q8IVM8 553 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 ZC3H7AQ8IWR0 971 aaKnown RBP16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 BANPQ8N9N5 519 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 RDH11Q8TC12 318 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 GAL3ST3Q96A11 431 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 L3HYPDHQ96EM0 354 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 APOPT1Q96IL0 206 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 IP6K3Q96PC2 410 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 TMEM237Q96Q45 408 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 SOX17Q9H6I2 414 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 CLK4Q9HAZ1 481 aaKnown RBP16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 RNF11Q9Y3C5 154 aa16.83■□□□□ 0.28
TNFSF13-204ENST00000396542 ATXN7O15265 892 aaPredicted RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 BMP10O95393 424 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 B3GALT4O96024 378 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 MMP11P24347 488 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 OTX2P32243 289 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 RAB8AP61006 207 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SKP1P63208 163 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 GGTA1PQ4G0N0 100 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 UNC50Q53HI1 259 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 BEND6Q5SZJ8 279 aaPredicted RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SHISA6Q6ZSJ9 500 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 RPS27LQ71UM5 84 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 LAPTM4BQ86VI4 370 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 APLFQ8IW19 511 aaPredicted RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SRRM1Q8IYB3 904 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SHISA5Q8N114 240 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 LSM14AQ8ND56 463 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 OR2L5Q8NG80 312 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 OR51Q1Q8NH59 317 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 APOBEC4Q8WW27 367 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 CCT6BQ92526 530 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 CCDC126Q96EE4 140 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 ZIM3Q96PE6 472 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 MS4A8Q9BY19 250 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SEMA4BQ9NPR2 832 aaPredicted RBP16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 SEMA3GQ9NS98 782 aa16.82■□□□□ 0.28
TNFSF13-204ENST00000396542 HCN3Q9P1Z3 774 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms