RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 KLHL31Q9H511 634 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ANKHQ9HCJ1 492 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 SLC22A11Q9NSA0 550 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 IL17BQ9UHF5 180 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 ADGRE2Q9UHX3 823 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 FARSAQ9Y285 508 aaKnown RBP18.24■□□□□ 0.51
HOXA9-202ENST00000396345 STK38LQ9Y2H1 464 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 USP24Q9UPU5 2620 aa18.24■□□□□ 0.51
HOXA9-202ENST00000396345 A0A1B0GTL3 188 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 LRIT2A6NDA9 550 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ZWINTO95229 277 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 NSA2O95478 260 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ZNF888P0CJ79 500 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ALOX12P18054 663 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 IL1RNP18510 177 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 FBLP22087 321 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 HPDP32754 393 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 PIK3CBP42338 1070 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ETV4P43268 484 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 DDX39BQ13838 428 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 NCF4Q15080 339 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 LETMD1Q6P1Q0 360 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 FRMD7Q6ZUT3 714 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 GPRIN3Q6ZVF9 776 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 SYVN1Q86TM6 617 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 AFAP1L2Q8N4X5 818 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ENDOVQ8N8Q3 282 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 OR9A4Q8NGU2 314 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 UTP15Q8TED0 518 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ZNF473Q8WTR7 871 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 SREK1Q8WXA9 508 aaKnown RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 GATA5Q9BWX5 397 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-202ENST00000396345 FAM117AQ9C073 453 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 ZNF225Q9UK10 706 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 TSC22D4Q9Y3Q8 395 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 PCDHGA6Q9Y5G7 932 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 SCN3AQ9NY46 2000 aa18.23■□□□□ 0.51
HOXA9-202ENST00000396345 FFAR3O14843 346 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 GPR42O15529 346 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 KLHL18O94889 574 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 OR4F21O95013 312 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 BPGMP07738 259 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 CD63P08962 238 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 PTPN4P29074 926 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 UCNP55089 124 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 PKNOX1P55347 436 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 RAB8AP61006 207 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 PHEXP78562 749 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 DSG2Q14126 1118 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 MPP2Q14168 576 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 TTC19Q6DKK2 380 aaPredicted RBP18.22■□□□□ 0.51
HOXA9-202ENST00000396345 CCDC81Q6ZN84 652 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 COX15Q7KZN9 410 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 OVCH1Q7RTY7 1134 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 PRSS41Q7RTY9 318 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 GOLGA6L1Q8N7Z2 621 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 HUS1BQ8NHY5 278 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 WDR20Q8TBZ3 569 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 GAL3ST3Q96A11 431 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 FKBP10Q96AY3 582 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 MTERF1Q99551 399 aaKnown RBP18.22■□□□□ 0.51
HOXA9-202ENST00000396345 MS4A8Q9BY19 250 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 AICDAQ9GZX7 198 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 TRPS1Q9UHF7 1281 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 NAALAD2Q9Y3Q0 740 aa18.22■□□□□ 0.51
HOXA9-202ENST00000396345 MRPS18BQ9Y676 258 aaKnown RBP18.22■□□□□ 0.51
HOXA9-202ENST00000396345 CELSR3Q9NYQ7 3312 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 H0YIG0 161 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SGK494L7N484 410 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 EFSO43281 561 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 TBX6O95947 436 aaPredicted RBP18.21■□□□□ 0.51
HOXA9-202ENST00000396345 ALBP02768 609 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SMIM10L1P0DMW3 83 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 WT1P19544 449 aaPredicted RBP18.21■□□□□ 0.51
HOXA9-202ENST00000396345 HNRNPH1P31943 449 aaKnown RBP18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SERPINB4P48594 390 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 TMPRSS3P57727 454 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SKP1P63208 163 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 IFT88Q13099 833 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 ADPRMQ3LIE5 342 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 DEFB134Q4QY38 66 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 FRG2Q64ET8 278 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 NIPAL1Q6NVV3 410 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 MRPL14Q6P1L8 145 aaKnown RBP18.21■□□□□ 0.51
HOXA9-202ENST00000396345 PDSS2Q86YH6 399 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 RNF175Q8N4F7 328 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 ZSCAN1Q8NBB4 408 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 STARD8Q92502 1023 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 MTFMTQ96DP5 389 aaKnown RBP18.21■□□□□ 0.51
HOXA9-202ENST00000396345 MS4A6EQ96DS6 147 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 CMTM7Q96FZ5 175 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SMIM10Q96HG1 83 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SLC45A3Q96JT2 553 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 FRG2BQ96QU4 278 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 F2RL3Q96RI0 385 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 SH3GL2Q99962 352 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 YIPF2Q9BWQ6 316 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 REXO4Q9GZR2 422 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms