RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 CENPKQ9BS16 269 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 ZNF700Q9H0M5 742 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 EPN3Q9H201 632 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 ALG9Q9H6U8 611 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 ZNF552Q9H707 407 aaPredicted RBP18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 SNX15Q9NRS6 342 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 FETUBQ9UGM5 382 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 SH2B3Q9UQQ2 575 aa18.28■□□□□ 0.52
CDKN1B-202ENST00000396340 IGHV1-45A0A0A0MS14 117 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 SUPT3HB4E1H0 165 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 K7EPI3 171 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 UGDHO60701 494 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 SUPT3HO75486 399 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 ALDH18A1P54886 795 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 IRF8Q02556 426 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 OR4D1Q15615 310 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 EXT1Q16394 746 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 XKR6Q5GH73 641 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 C10orf62Q5T681 223 aaPredicted RBP18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 ISLR2Q6UXK2 745 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 IQCKQ8N0W5 287 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 SNX31Q8N9S9 440 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 PLPP5Q8NEB5 264 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 ZCCHC10Q8TBK6 192 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 TBC1D20Q96BZ9 403 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 REPS1Q96D71 796 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 MAGEB10Q96LZ2 347 aaPredicted RBP18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 ATOH8Q96SQ7 321 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 SLC29A3Q9BZD2 475 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 PPCSQ9HAB8 311 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 MRPS33Q9Y291 106 aaKnown RBP18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 ANGPTL3Q9Y5C1 460 aa18.27■□□□□ 0.52
CDKN1B-202ENST00000396340 SGK494L7N484 410 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 CCNT2O60583 730 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 FAM155BO75949 473 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 UQCRHP07919 91 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 RNH1P13489 461 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 GFAPP14136 432 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 HSPA7P48741 367 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 ARFIP1P53367 373 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 PHEXP78562 749 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 E2F2Q14209 437 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 DEFB134Q4QY38 66 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 B3GNTL1Q67FW5 361 aaPredicted RBP18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 TRIM40Q6P9F5 258 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 IGFL2Q6UWQ7 119 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 CMC1Q7Z7K0 106 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 LAPTM4BQ86VI4 370 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 PRSS58Q8IYP2 241 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 SPATA6LQ8N4H0 392 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 ISL2Q96A47 359 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 THOC3Q96J01 351 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 PAFAH2Q99487 392 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 VN1R1Q9GZP7 353 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 RHBGQ9H310 441 aa18.26■□□□□ 0.51
CDKN1B-202ENST00000396340 EXOC1LA0A1B0GW35 172 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 DYTNA2CJ06 578 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 BLACEA4D250 179 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 MAGEB17A8MXT2 336 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 CLDN4O14493 209 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 VPS4BO75351 444 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 WFS1O76024 890 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 FHP07954 510 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 SNRPAP09012 282 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 COX6A1P12074 109 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 HNF4AP41235 474 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 GDF5P43026 501 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 TSFMP43897 325 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 FOXK1P85037 733 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 SLBPQ14493 270 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 TMEM35AQ53FP2 167 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 LIPJQ5W064 366 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 CHSY3Q70JA7 882 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 CPEB2Q7Z5Q1 589 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 ANKRD53Q8N9V6 530 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 OR2L5Q8NG80 312 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 UTP15Q8TED0 518 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 WDR77Q9BQA1 342 aaPredicted RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 TMEM79Q9BSE2 394 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 ILKAPQ9H0C8 392 aaPredicted RBP18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 SYNPO2LQ9H987 977 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 ZNF160Q9HCG1 818 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 VPS4AQ9UN37 437 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 TSC22D4Q9Y3Q8 395 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 SPACA6W5XKT8 324 aa18.25■□□□□ 0.51
CDKN1B-202ENST00000396340 CNTRLQ7Z7A1 2325 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 TAPBPO15533 448 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 RDH16O75452 317 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 PRR35P0CG20 571 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 ZNF888P0CJ79 500 aaPredicted RBP18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 KCNC1P48547 511 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 CD97P48960 835 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 MFAP5Q13361 173 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 NAA30Q147X3 362 aaPredicted RBP18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 TLR1Q15399 786 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 NSDHLQ15738 373 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 PLAG1Q6DJT9 500 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 MED27Q6P2C8 311 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 QSOX2Q6ZRP7 698 aa18.24■□□□□ 0.51
CDKN1B-202ENST00000396340 PARP9Q8IXQ6 854 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms