RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ARHGAP33O14559 1287 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 MAN1A2O60476 641 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TULP3O75386 442 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CCNKO75909 580 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 HPRP00739 348 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SEMG1P04279 462 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 JUPP14923 745 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PRKACAP17612 351 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ALDH4A1P30038 563 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RRM2P31350 389 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CCR7P32248 378 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 HNF4AP41235 474 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PIK3CBP42338 1070 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TSFMP43897 325 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 NRIP1P48552 1158 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SEPHS1P49903 392 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ARSFP54793 590 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PPP2R2BQ00005 443 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TOP3AQ13472 1001 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 LAPTM5Q13571 262 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 COL9A2Q14055 689 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 SUZ12Q15022 739 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 ACOX1Q15067 660 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PYCR3Q53H96 274 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 C2orf27AQ580R0 203 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TMEM196Q5HYL7 178 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SNAP47Q5SQN1 464 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CCNJQ5T5M9 372 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ATXN7L2Q5T6C5 722 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 PXDC1Q5TGL8 231 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PRPF38BQ5VTL8 546 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 RSBN1Q5VWQ0 802 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 ATG9BQ674R7 924 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 Q6ZSR9 355 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TRMT11Q7Z4G4 463 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 VN1R5Q7Z5H4 357 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ADGRD2Q7Z7M1 963 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PIM3Q86V86 326 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PSMA8Q8TAA3 256 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 C1orf216Q8TAB5 229 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FBLIM1Q8WUP2 373 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FAR1Q8WVX9 515 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TRIM63Q969Q1 353 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ZNF566Q969W8 418 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RMDN1Q96DB5 314 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LINGO1Q96FE5 620 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GPR63Q9BZJ6 419 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ACTL8Q9H568 366 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 NTN4Q9HB63 628 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PIH1D1Q9NWS0 290 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 CMTM6Q9NX76 183 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GALPQ9UBC7 116 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 KCNN3Q9UGI6 736 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RNF112Q9ULX5 631 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SLC17A4Q9Y2C5 497 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ASPDHA6ND91 283 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR51F1A6NGY5 319 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 FADS2P1A8MWK0 482 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 B8ZZF3 427 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 M0R3G1 203 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 WNT9AO14904 365 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TSPAN3O60637 253 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RNGTTO60942 597 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 TNFRSF21O75509 655 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CLDN7O95471 211 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 KRT8P05787 483 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ARSAP15289 507 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IL7RP16871 459 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 HRH2P25021 359 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PTPN6P29350 595 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IL12AP29459 219 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 CTHP32929 405 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 NNMTP40261 264 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 HTR3AP46098 478 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PXNP49023 591 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 ERVPABLB-1P60509 514 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 TRA2BP62995 288 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 HTRA3P83110 453 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 RUNX3Q13761 415 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GTF2H2Q13888 395 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PON2Q15165 354 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ZXDCQ2QGD7 858 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 CTU2Q2VPK5 515 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 TMEM236Q5W0B7 351 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GTF2H2CQ6P1K8 395 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 LCTLQ6UWM7 567 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IDO2Q6ZQW0 420 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 IKBIPQ70UQ0 350 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 PARS2Q7L3T8 475 aaKnown RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 HSD11B1LQ7Z5J1 315 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 GLRX5Q86SX6 157 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ADCK1Q86TW2 530 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 C12orf40Q86WS4 652 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 C8orf59Q8N0T1 100 aaPredicted RBP5.16□□□□□ -1.58
VPS41-203ENST00000395969 MIER2Q8N344 545 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 ZNF454Q8N9F8 522 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 SMRP1Q8NCR6 262 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR8J2Q8NGG1 315 aa5.16□□□□□ -1.58
VPS41-203ENST00000395969 OR6P1Q8NGX9 317 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms