RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RHDQ02161 417 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 OGFOD3Q6PK18 319 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PTRH1Q86Y79 214 aaKnown RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 TMEM126BQ8IUX1 230 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 C1orf52Q8N6N3 182 aaKnown RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 LMNTD1Q8N9Z9 388 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 CLHC1Q8NHS4 586 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 NRG4Q8WWG1 115 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PATE1Q8WXA2 126 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 RSRC1Q96IZ7 334 aaKnown RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ITCHQ96J02 903 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 DUSP23Q9BVJ7 150 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PCDHAC1Q9H158 963 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ALG2Q9H553 416 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 SLAMF8Q9P0V8 285 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ACTR3BQ9P1U1 418 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 KIR2DS5A0A0G2JLQ3 304 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 A0A0G2JNG1 304 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 TCRBV3S1A0A5B6 114 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 AQP12BA6NM10 295 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 KIR2DS3K7RE56 304 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 HTR1EP28566 365 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 TIA1P31483 386 aaKnown RBP eCLIP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 RAE1P78406 368 aaKnown RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 REEP5Q00765 189 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 LIPEQ05469 1076 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 SLC14A1Q13336 389 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 KIR2DS5Q14953 304 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 FXNQ16595 210 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 RABL3Q5HYI8 236 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 DBX2Q6ZNG2 339 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 SPATA24Q86W54 205 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 AQP12AQ8IXF9 295 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 EID2Q8N6I1 236 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 LINC01555Q8NAE3 123 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 OR4C6Q8NH72 309 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 LRGUKQ96M69 825 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 ZNF624Q9P2J8 865 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PCDHB11Q9Y5F2 797 aa18.47■□□□□ 0.55
LMNB1-202ENST00000395354 PTPRZ1P23471 2315 aaPredicted RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 ASCC3Q8N3C0 2202 aaKnown RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 A0A096LPI6 279 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 C4orf47A7E2U8 309 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 NVLO15381 856 aaKnown RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 NOBOXO60393 691 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 GSK3BP49841 420 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 ABATP80404 500 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 MRPS22P82650 360 aaKnown RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 LRIF1Q5T3J3 769 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 ADNP2Q6IQ32 1131 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 LCN8Q6JVE9 175 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 CAMKMTQ7Z624 323 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 GPR180Q86V85 440 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 C2orf73Q8N5S3 287 aaPredicted RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 OR52E1Q8NGJ3 308 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 CXorf40BQ96DE9 158 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 KCTD14Q9BQ13 255 aaPredicted RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 TACO1Q9BSH4 297 aaKnown RBP18.46■□□□□ 0.55
LMNB1-202ENST00000395354 EBPLQ9BY08 206 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 SPNS1Q9H2V7 528 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 VCX3BQ9H321 246 aa18.46■□□□□ 0.55
LMNB1-202ENST00000395354 GVINP1Q7Z2Y8 2422 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ZNF292O60281 2723 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 CASQ2O14958 399 aaPredicted RBP18.45■□□□□ 0.54
LMNB1-202ENST00000395354 GDF9O60383 454 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ANXA4P09525 319 aaPredicted RBP18.45■□□□□ 0.54
LMNB1-202ENST00000395354 SLC19A1P41440 591 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 KIR3DL1P43629 444 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 PHC1P78364 1004 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 PRDX1Q06830 199 aaKnown RBP18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ICE2Q659A1 982 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ZCCHC8Q6NZY4 707 aaKnown RBP18.45■□□□□ 0.54
LMNB1-202ENST00000395354 RNF111Q6ZNA4 994 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 PQLC1Q8N2U9 271 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 METTL4Q8N3J2 472 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 GPR156Q8NFN8 814 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 OR8J2Q8NGG1 315 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 SLC37A2Q8TED4 501 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 NUDT8Q8WV74 236 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 EGLN2Q96KS0 407 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 PPM1MQ96MI6 270 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ACAT2Q9BWD1 397 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 PRM3Q9NNZ6 103 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 CPNE7Q9UBL6 633 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 ICKQ9UPZ9 632 aa18.45■□□□□ 0.54
LMNB1-202ENST00000395354 TRBV5-3A0A0A0MS03 114 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 PRSS51A0A1B0GVH4 220 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 SIGLEC6O43699 453 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 PCDH7O60245 1069 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 SEMA3DO95025 777 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 CCNDBP1O95273 360 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 HRH2P25021 359 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 SHMT2P34897 504 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 TRPC1P48995 793 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 YBX1P67809 324 aaKnown RBP18.44■□□□□ 0.54
LMNB1-202ENST00000395354 PGS1Q32NB8 556 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 RUNDC3AQ59EK9 446 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 CMPK2Q5EBM0 449 aa18.44■□□□□ 0.54
LMNB1-202ENST00000395354 SLC9B2Q86UD5 537 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms