RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DEFB134Q4QY38 66 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 ANKRD22Q5VYY1 191 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 ARMC3Q5W041 872 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 CEP128Q6ZU80 1094 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 AFAP1L2Q8N4X5 818 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 ZNF740Q8NDX6 193 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 MAIP1Q8WWC4 291 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 PTCHD1Q96NR3 888 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 COMMD10Q9Y6G5 202 aa19.79■□□□□ 0.76
TRAF4-203ENST00000394925 A0A1B0GTH9 108 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 ZCWPW2A0A1B0GU75 182 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 MAGEB16A2A368 324 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 SDR42E2A6NKP2 422 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 EIF3FO00303 357 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 NDUFS4O43181 175 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 GALR3O60755 368 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 HAUS5O94927 633 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 SERPIND1P05546 499 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 JAK1P23458 1154 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 MEOX1P50221 254 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 HLCSP50747 726 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 GPS1Q13098 491 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 LCTLQ6UWM7 567 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 CD163Q86VB7 1156 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 POGLUT1Q8NBL1 392 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 FAM57AQ8TBR7 257 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 EEF1AKMT1Q8WVE0 214 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 AARSD1Q9BTE6 412 aaKnown RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 SGPP1Q9BX95 441 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 RBSNQ9H1K0 784 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 TRIM45Q9H8W5 580 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 PARVBQ9HBI1 364 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 C20orf96Q9NUD7 363 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 TRMT6Q9UJA5 497 aaKnown RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 MAP1AP78559 2803 aaPredicted RBP19.78■□□□□ 0.76
TRAF4-203ENST00000394925 HCFC1P51610 2035 aa19.78■□□□□ 0.76
TRAF4-203ENST00000394925 OR1F1O43749 312 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 CDC40O60508 579 aaKnown RBP eCLIP19.77■□□□□ 0.769e-6■■■□□ 15.9
TRAF4-203ENST00000394925 NPPBP16860 134 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 ALOX12P18054 663 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 CCND1P24385 295 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 MAGEA6P43360 314 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 BTG2P78543 158 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 SULF2Q8IWU5 870 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 PALM2Q8IXS6 379 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 MARVELD2Q8N4S9 558 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 FBXO5Q9UKT4 447 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 KLF13Q9Y2Y9 288 aaPredicted RBP19.77■□□□□ 0.76
TRAF4-203ENST00000394925 HRH3Q9Y5N1 445 aa19.77■□□□□ 0.76
TRAF4-203ENST00000394925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-203ENST00000394925 SAGE2PA6NJ88 616 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 GOLGA8MH3BSY2 632 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 FCHO1O14526 889 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 HS6ST1O60243 411 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 CEP104O60308 925 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 PRMT3O60678 531 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 DIAPH2O60879 1101 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 C8GP07360 202 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 ZNF888P0CJ79 500 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-203ENST00000394925 TRHRP34981 398 aaPredicted RBP19.76■□□□□ 0.75
TRAF4-203ENST00000394925 RGS4P49798 205 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 CCR8P51685 355 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 LRRC8EQ6NSJ5 796 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 HAUS8Q9BT25 410 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 DEFB126Q9BYW3 111 aa19.76■□□□□ 0.75
TRAF4-203ENST00000394925 ZNF407Q9C0G0 2248 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 NKX2-6A6NCS4 301 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 FAM90A27PA6NNH2 459 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 A8MUA0 341 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 KLRC4-KLRK1H3BQV0 150 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 MLNP12872 115 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 IGFBP2P18065 325 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 TFEBP19484 476 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 MAOAP21397 527 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 SKP1P63208 163 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 PWP1Q13610 501 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 TMEM211Q6ICI0 200 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 UGT3A1Q6NUS8 523 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 QSOX2Q6ZRP7 698 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 LMNTD2Q8IXW0 634 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 ABHD11Q8NFV4 315 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 CALML6Q8TD86 181 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 ASB5Q8WWX0 329 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 PYCR2Q96C36 320 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 NDNQ99608 321 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 UCK2Q9BZX2 261 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 NPDC1Q9NQX5 325 aaPredicted RBP19.75■□□□□ 0.75
TRAF4-203ENST00000394925 RNF6Q9Y252 685 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 DNAJC13O75165 2243 aa19.75■□□□□ 0.75
TRAF4-203ENST00000394925 PEX1O43933 1283 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 PDE9AO76083 593 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 KRT14P02533 472 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HIST1H2AGP0C0S8 130 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 CD1EP15812 388 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HIST1H2ADP20671 130 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 TIAL1Q01085 375 aaKnown RBP eCLIP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 DHX9Q08211 1270 aaKnown RBP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 SP140Q13342 867 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 PHKG1Q16816 387 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HSP90AA5PQ58FG0 334 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms