RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 CSGALNACT1Q8TDX6 532 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 ZNF347Q96SE7 839 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 FEVQ99581 238 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 WRAP53Q9BUR4 548 aaKnown RBP12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 RAD18Q9NS91 495 aa12.97□□□□□ -0.33
GTF2F1-201ENST00000394456 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 FAM227AF5H4B4 570 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 K7ESM1 405 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 CBFA2T3O75081 653 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 CA3P07451 260 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 HLA-EP13747 358 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 TIMP2P16035 220 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 IDSP22304 550 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 CRATP43155 626 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 POLR2LP62875 67 aaKnown RBP12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 RGNQ15493 299 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 INAQ16352 499 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 MPEG1Q2M385 716 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 PLEKHS1Q5SXH7 462 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 CPTPQ5TA50 214 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 TRIM73Q86UV7 250 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 TAMM41Q96BW9 452 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 NIPSNAP1Q9BPW8 284 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 C19orf43Q9BQ61 176 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 OR51B5Q9H339 312 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 RUBCNLQ9H714 662 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 ZBTB20Q9HC78 741 aaPredicted RBP12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 SACM1LQ9NTJ5 587 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 TMED5Q9Y3A6 229 aa12.96□□□□□ -0.33
GTF2F1-201ENST00000394456 RGS10O43665 173 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 SERPINB7O75635 380 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 TGFB1P01137 390 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 HNRNPA1P09651 372 aaKnown RBP eCLIP12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 CD36P16671 472 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 NNMTP40261 264 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 CD97P48960 835 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 DGKGP49619 791 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 MVDP53602 400 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 ITGA1P56199 1179 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 HBA1P69905 142 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 CBX3Q13185 183 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 RFX4Q33E94 735 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 CACTIN-AS1Q8N1I8 211 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 TCAIMQ8N3R3 496 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 OR9Q2Q8NGE9 314 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 OR8J2Q8NGG1 315 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 OR4A15Q8NGL6 344 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 RHCGQ9UBD6 479 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 SH3GLB1Q9Y371 365 aa12.96□□□□□ -0.34
GTF2F1-201ENST00000394456 LRRK1Q38SD2 2015 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PLXNA2O75051 1894 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 KLHL18O94889 574 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 SLCO2B1O94956 709 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 C6orf47O95873 294 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF8P17098 575 aaPredicted RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 MAGP20916 626 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PTPN5P54829 565 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 CYP4F2P78329 520 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 KCNC4Q03721 635 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 IL18R1Q13478 541 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 KEAP1Q14145 624 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 DMC1Q14565 340 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 CARTPTQ16568 116 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 SYTL3Q4VX76 610 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 FAHD1Q6P587 224 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 BRAT1Q6PJG6 821 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ARMCX6Q7L4S7 300 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PAGE2Q7Z2X7 111 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 DNAJB8Q8NHS0 232 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ASZ1Q8WWH4 475 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 TPRKBQ9Y3C4 175 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PCDHGB1Q9Y5G3 927 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 CXorf51AA0A1B0GTR3 108 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 M0R082 166 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 GSTM1P09488 218 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ADH5P11766 374 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 XPAP23025 273 aaPredicted RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 VIPR1P32241 457 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 IDH2P48735 452 aaKnown RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 ACOX1Q15067 660 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 INAVAQ3KP66 663 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 RASGRP3Q8IV61 690 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 SETD9Q8NE22 299 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms