RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 METTL2AQ96IZ6 378 aaKnown RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 BTBD1Q9H0C5 482 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 SCHIP1Q9P0W5 487 aaPredicted RBP14.44□□□□□ -0.1
GPC3-202ENST00000394299 BTNL2Q9UIR0 455 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 AP3M1Q9Y2T2 418 aa14.44□□□□□ -0.1
GPC3-202ENST00000394299 CCNDBP1O95273 360 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 HOXB3P14651 431 aaPredicted RBP14.43□□□□□ -0.1
GPC3-202ENST00000394299 POLR2IP36954 125 aaKnown RBP14.43□□□□□ -0.1
GPC3-202ENST00000394299 HTR4Q13639 388 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 AGERQ15109 404 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 RGNQ15493 299 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 CYP2A13Q16696 494 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 SLC9B2Q86UD5 537 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 ZDHHC21Q8IVQ6 265 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 ADGRF3Q8IZF5 1079 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 VPS37AQ8NEZ2 397 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 ZFP28Q8NHY6 868 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 NMD3Q96D46 503 aaKnown RBP14.43□□□□□ -0.1
GPC3-202ENST00000394299 GDF15Q99988 308 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 APOOQ9BUR5 198 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 FGF22Q9HCT0 170 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 LMCD1Q9NZU5 365 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 ATP6V1HQ9UI12 483 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 PLXND1Q9Y4D7 1925 aa14.43□□□□□ -0.1
GPC3-202ENST00000394299 IGKV1-8A0A0C4DH67 115 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 ANKDD1BA6NHY2 528 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 VILLO15195 856 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 B4GAT1O43505 415 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 SERPIND1P05546 499 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 ETFAP13804 333 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CD72P21854 359 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PTX3P26022 381 aaPredicted RBP14.42□□□□□ -0.1
GPC3-202ENST00000394299 SHMT2P34897 504 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 DCTP40126 519 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PIK3CBP42338 1070 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CRATP43155 626 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 TPRG1LQ5T0D9 272 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CPZQ66K79 652 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 RD3Q7Z3Z2 195 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CAMKMTQ7Z624 323 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 ADCK2Q7Z695 626 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 KRT78Q8N1N4 520 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 TRIML2Q8N7C3 387 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PPCDCQ96CD2 204 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 TPD52L3Q96J77 140 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CAMK1GQ96NX5 476 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 GABRG3Q99928 467 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 ZNF717Q9BY31 904 aaPredicted RBP14.42□□□□□ -0.1
GPC3-202ENST00000394299 SLC6A16Q9GZN6 736 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CHST8Q9H2A9 424 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 TOR3AQ9H497 397 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 KLHL20Q9Y2M5 609 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 DNMT3AQ9Y6K1 912 aaPredicted RBP14.42□□□□□ -0.1
GPC3-202ENST00000394299 TRBV23OR9-2A0A075B6M9 112 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 WASHC1A8K0Z3 465 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PDZK1P1A8MUH7 402 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 H3BSA7 217 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 OR1F1O43749 312 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 E2F6O75461 281 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 GCM2O75603 506 aaPredicted RBP14.42□□□□□ -0.1
GPC3-202ENST00000394299 EML2O95834 649 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 GSTT1P30711 240 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 PIGAP37287 484 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 MVDP53602 400 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 VLDLRP98155 873 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 MAP7Q14244 749 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CCNYL2Q5T2Q4 361 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 ANXA8L1Q5VT79 327 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 WASH2PQ6VEQ5 465 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 SYNPOQ8N3V7 929 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 RIPOR3Q96MK2 946 aa14.42□□□□□ -0.1
GPC3-202ENST00000394299 CLK4Q9HAZ1 481 aaKnown RBP14.42□□□□□ -0.1
GPC3-202ENST00000394299 CCDC160A6NGH7 325 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 RNASET2O00584 256 aaKnown RBP14.41□□□□□ -0.1
GPC3-202ENST00000394299 FKBP9O95302 570 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 ALBP02768 609 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 THRBP10828 461 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 ELK4P28324 431 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 ACSL1P33121 698 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 DEPDC1Q5TB30 811 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 USP51Q70EK9 711 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 FKBP9P1Q75LS8 142 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 CEP68Q76N32 757 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 HORMAD1Q86X24 394 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 SMPDL3AQ92484 453 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 SIPA1Q96FS4 1042 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 OSBPL10Q9BXB5 764 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 TRIM4Q9C037 500 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 AMBRA1Q9C0C7 1298 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 LHX9Q9NQ69 397 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 ACSL5Q9ULC5 683 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 SLC17A4Q9Y2C5 497 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 MITFO75030 526 aaPredicted RBP14.41□□□□□ -0.1
GPC3-202ENST00000394299 OPN1SWP03999 348 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 TNFRSF1BP20333 461 aa14.41□□□□□ -0.1
GPC3-202ENST00000394299 AK4P27144 223 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms