RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CPA6Q8N4T0 437 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 ZNF675Q8TD23 568 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 MYDGFQ969H8 173 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 TMEM159Q96B96 161 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PKP4Q99569 1192 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 BTNL2Q9UIR0 455 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 SLC25A13Q9UJS0 675 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 EXO1Q9UQ84 846 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 MAP4K5Q9Y4K4 846 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PRAMEF25A6NGN4 478 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 A8MU76 341 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 UPK1BO75841 260 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 DNTTP04053 509 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 CDK1P06493 297 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PDHA2P29803 388 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 GDPD4Q6W3E5 623 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 ZNF605Q86T29 641 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 TMEM25Q86YD3 366 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 TCEAL8Q8IYN2 117 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 C11orf24Q96F05 449 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 HMX1Q9NP08 348 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 RHCGQ9UBD6 479 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 SPASTQ9UBP0 616 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 DUSP12Q9UNI6 340 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 CCL26Q9Y258 94 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 NEDD8-MDP1E9PL57 170 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 H0YIV9 168 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 KPNA5O15131 536 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 TEX28O15482 410 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 MRPS14O60783 128 aaKnown RBP13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 IMPA1P29218 277 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 HNF4AP41235 474 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 ASMTP46597 345 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 PRIM2P49643 509 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 IFI44LQ53G44 452 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 ANXA8L1Q5VT79 327 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 STEAP3Q658P3 488 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 CPXM2Q8N436 756 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 NEIL2Q969S2 332 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 Q96MT0 163 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
GAPVD1-205ENST00000394084 DOCK6Q96HP0 2047 aa13.4□□□□□ -0.27
GAPVD1-205ENST00000394084 DSCR3O14972 297 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 UGDHO60701 494 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 AOC2O75106 756 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 MEF2AQ02078 507 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 TP53BP2Q13625 1128 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 SCARB2Q14108 478 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 TBCEQ15813 527 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ARMCX4Q5H9R4 360 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC46A3Q7Z3Q1 461 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 FCGR1BQ92637 280 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 MAGEB10Q96LZ2 347 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 CENPOQ9BU64 300 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 MMP27Q9H306 513 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 PCDHGA2Q9Y5H1 932 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 AGAP5A6NIR3 686 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 PCDH17O14917 1159 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 SLCO2B1O94956 709 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 TGFB1P01137 390 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ADORA3P0DMS8 318 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 SPNP16150 400 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF8P17098 575 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 MVDP53602 400 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 MPP7Q5T2T1 576 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 RASGEF1AQ8N9B8 481 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 STARD8Q92502 1023 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF558Q96NG5 402 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 CCM2Q9BSQ5 444 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 EMILIN2Q9BXX0 1053 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF282Q9UDV7 671 aaPredicted RBP13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
GAPVD1-205ENST00000394084 E9PQ18 207 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PSIP1O75475 530 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CATP04040 527 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ALOX12P18054 663 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 SOAT1P35610 550 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CSNK2BP67870 215 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 TEAD4Q15561 434 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 GCNT6Q5T4J0 391 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ZDHHC20Q5W0Z9 365 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 USP43Q70EL4 1123 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms